Coarse-grained modelling of nucleic acids by Sulc, P

Phenotype bias determines how natural RNA structures occupy the morphospace of all possible shapes by Dingle, K, Ghaddar, F, Šulc, P, Louis, AA

Designing the self-assembly of arbitrary shapes using minimal complexity building blocks by Bohlin, J, Turberfield, AJ, Louis, AA, Šulc, P

Simulating a burnt-bridges DNA motor with a coarse-grained DNA model by Šulc, P, Ouldridge, T, Romano, F, Doye, J, Louis, A

A nucleotide-level coarse-grained model of RNA by Šulc, P, Romano, F, Ouldridge, T, Doye, J, Louis, A

Coarse-grained modeling of DNA and DNA nanotechnology by Ouldridge, T, Sulc, P, Romano, F, Louis, A, Doye, J

Simulating a burnt-bridges DNA motor with a coarse-grained DNA model by Sulc, P, Ouldridge, T, Romano, F, Doye, J, Louis, A

DNA hybridization kinetics: zippering, internal displacement and sequence dependence. by Ouldridge, T, Sulc, P, Romano, F, Doye, J, Louis, A

Torsion dissipated energy of hard rubbers as function of hyperelastic deformation energy of the Yeoh model by Šulc P., Pešek L., Bula V., Košina J., Cibulka J.

Get full text

Modelling toehold-mediated RNA strand displacement by Šulc, P, Ouldridge, TE, Romano, F, Doye, JPK, Louis, AA

Coarse-grained modelling of DNA-RNA hybrids by Ratajczyk, EJ, Šulc, P, Turberfield, AJ, Doye, JPK, Louis, AA

Coarse-grained modelling of supercoiled RNA by Matek, C, Šulc, P, Randisi, F, Doye, J, Louis, A

Sequence-dependent thermodynamics of a coarse-grained DNA model. by Šulc, P, Romano, F, Ouldridge, T, Rovigatti, L, Doye, J, Louis, A

DNA hairpins primarily promote duplex melting rather than inhibiting hybridization by Schreck, J, Ouldridge, T, Romano, F, Sulc, P, Shaw, L, Louis, A, Doye, J

On the biophysics and kinetics of toehold-mediated DNA strand displacement by Srinivas, N, Ouldridge, T, Sulc, P, Schaeffer, J, Yurke, B, Louis, A, Doye, J, Winfree, E

TacoxDNA: A user-friendly web server for simulations of complex DNA structures, from single strands to origami by Suma, A, Poppleton, E, Matthies, M, Šulc, P, Romano, F, Louis, AA, Doye, JPK, Micheletti, C, Rovigatti, L

Coarse-graining DNA for simulations of DNA nanotechnology. by Doye, J, Ouldridge, T, Louis, A, Romano, F, Šulc, P, Matek, C, Snodin, B, Rovigatti, L, Schreck, J, Harrison, R, Smith, W

Introducing improved structural properties and salt dependence into a coarse-grained model of DNA. by Snodin, B, Randisi, F, Mosayebi, M, Šulc, P, Schreck, J, Romano, F, Ouldridge, T, Tsukanov, R, Nir, E, Louis, A, Doye, J