MOLECULAR DYNAMICS AND STRUCTURAL COMPARISON APPROACH TO UNDERSTANDING THE ROLE OF KNOTS IN PROTEINS by AGATA P. PERLINSKA, JOANNA M. MACNAR, JOANNA I. SULKOWSKA

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Restriction of S-adenosylmethionine conformational freedom by knotted protein binding sites. by Agata P Perlinska, Adam Stasiulewicz, Ewa K Nawrocka, Krzysztof Kazimierczuk, Piotr Setny, Joanna I Sulkowska

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Slipknotted and unknotted monovalent cation-proton antiporters evolved from a common ancestor. by Vasilina Zayats, Agata P Perlinska, Aleksandra I Jarmolinska, Borys Jastrzebski, Stanislaw Dunin-Horkawicz, Joanna I Sulkowska

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Amino acid variants of SARS-CoV-2 papain-like protease have impact on drug binding. by Agata P Perlinska, Adam Stasiulewicz, Mai Lan Nguyen, Karolina Swiderska, Mikolaj Zmudzinski, Alicja W Maksymiuk, Marcin Drag, Joanna I Sulkowska

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Nucleolar Essential Protein 1 (Nep1): Elucidation of enzymatic catalysis mechanism by molecular dynamics simulation and quantum mechanics study by Mateusz Jedrzejewski, Barbara Belza, Iwona Lewandowska, Marta Sadlej, Agata P. Perlinska, Rafal Augustyniak, Thomas Christian, Ya-Ming Hou, Marcin Kalek, Joanna I. Sulkowska

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