Analysis and design of RNA sequencing experiments for identifying isoform regulation by Katz, Yarden, Airoldi, Edoardo M., Wang, Eric T, Burge, Christopher B

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A Conserved Cell Growth Cycle Can Account for the Environmental Stress Responses of Divergent Eukaryotes by Airoldi, Edoardo M., van Oudenaarden, Alexander, Botstein, David, Slavov, Nikolai G

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Constant Growth Rate Can Be Supported by Decreasing Energy Flux and Increasing Aerobic Glycolysis by Slavov, Nikolai, Budnik, Bogdan A., Schwab, David, Airoldi, Edoardo M., van Oudenaarden, Alexander

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Defining the Essential Function of Yeast Hsf1 Reveals a Compact Transcriptional Program for Maintaining Eukaryotic Proteostasis by Solís, Eric J., Pandey, Jai P., Zheng, Xu, Airoldi, Edoardo M., Pincus, David, Denic, Vladimir, Jin, Dexter X., Gupta, Piyush

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Musashi proteins are post-transcriptional regulators of the epithelial-luminal cell state by Katz, Yarden, Li, Feifei, Lambert, Nicole J., Tam, Wai-Leong, Airoldi, Edoardo M., Lengner, Christopher J., Yu, Zhengquan, Jaenisch, Rudolf, Sokol, Ethan Samuel, Cheng, Albert W., Gupta, Piyush, Burge, Christopher B

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Systems-level dynamic analyses of fate change in murine embryonic stem cells by Lu, Rong, Markowetz, Florian, Unwin, Richard D., Leek, Jeffrey T., Airoldi, Edoardo M., MacArthur, Ben D., Lachmann, Alexander, Rozov, Roye, Ma’ayan, Avi, Troyanskaya, Olga G., Whetton, Anthony D., Lemischka, Ihor R., Boyer, Laurie Ann

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