Lessons from Dwarf8 on the strengths and weaknesses of structured association mapping. by Sara J Larsson, Alexander E Lipka, Edward S Buckler

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Inhibition of ethylene involved in resistance to E. turcicum in an exotic-derived double haploid maize population by Sarah Lipps, Alexander E. Lipka, Santiago Mideros, Tiffany Jamann

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Regularized multi-trait multi-locus linear mixed models for genome-wide association studies and genomic selection in crops by Aurélie C. Lozano, Hantian Ding, Naoki Abe, Alexander E. Lipka

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Crop modeling suggests limited transpiration would increase yield of sorghum across drought-prone regions of the United States by Rubí Raymundo, Greg Mclean, Sarah Sexton-Bowser, Alexander E. Lipka, Geoffrey P. Morris

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An assessment of the performance of the logistic mixed model for analyzing binary traits in maize and sorghum diversity panels. by Esperanza Shenstone, Julian Cooper, Brian Rice, Martin Bohn, Tiffany M Jamann, Alexander E Lipka

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Genetic mapping of sorghum resistance to an Illinois isolate of Colletotrichum sublineola by Ashmita Khanal, Pragya Adhikari, Christopher Kaiser, Alexander E. Lipka, Tiffany M. Jamann, Santiago X. Mideros

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Accuracy of Genomic Prediction of Yield and Sugar Traits in <i>Saccharum</i> spp. Hybrids by Md. S. Islam, Per McCord, Quentin D. Read, Lifang Qin, Alexander E. Lipka, Sushma Sood, James Todd, Marcus Olatoye

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Regulatory variation controlling architectural pleiotropy in maize by Edoardo Bertolini, Brian R. Rice, Max Braud, Jiani Yang, Sarah Hake, Josh Strable, Alexander E. Lipka, Andrea L. Eveland

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A first look at the ability to use genomic prediction for improving the ratooning ability of sugarcane by Md. Sariful Islam, Keo Corak, Per McCord, Per McCord, Amanda M. Hulse-Kemp, Amanda M. Hulse-Kemp, Alexander E. Lipka

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GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction by You Tang, Xiaolei Liu, Jiabo Wang, Meng Li, Qishan Wang, Feng Tian, Zhongbin Su, Yuchun Pan, Di Liu, Alexander E. Lipka, Edward S. Buckler, Zhiwu Zhang

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Genome-wide association analysis for emergence of deeply sown rice (Oryza sativa) reveals novel aus-specific phytohormone candidate genes for adaptation to dry-direct seeding in th... by Sandeep A. Sakhale, Sandeep A. Sakhale, Sandeep A. Sakhale, Shailesh Yadav, Shailesh Yadav, Lindsay V. Clark, Lindsay V. Clark, Alexander E. Lipka, Arvind Kumar, Arvind Kumar, Erik J. Sacks

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Time dependent genetic analysis links field and controlled environment phenotypes in the model C4 grass Setaria. by Max J Feldman, Rachel E Paul, Darshi Banan, Jennifer F Barrett, Jose Sebastian, Muh-Ching Yee, Hui Jiang, Alexander E Lipka, Thomas P Brutnell, José R Dinneny, Andrew D B Leakey, Ivan Baxter

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Genome‐wide association and genomic prediction for biomass yield in a genetically diverse Miscanthus sinensis germplasm panel phenotyped at five locations in Asia and North America... by Lindsay V. Clark, Maria S. Dwiyanti, Kossonou G. Anzoua, Joe E. Brummer, Bimal Kumar Ghimire, Katarzyna Głowacka, Megan Hall, Kweon Heo, Xiaoli Jin, Alexander E. Lipka, Junhua Peng, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, Erik J. Sacks

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Genome‐wide association and genomic prediction for yield and component traits of Miscanthus sacchariflorus by Joyce N. Njuguna, Lindsay V. Clark, Alexander E. Lipka, Kossonou G. Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S. Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Douglas A. Johnson, Hironori Nagano, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, Erik J. Sacks

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Genotype by environment model predictive ability in Miscanthus by Sarah Widener, Joyce N. Njuguna, Lindsay V. Clark, Kossonou G. Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S. Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Uffe Jørgensen, Jens Bonderup Kjeldsen, Hironori Nagano, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Diego Jarquin, Erik Sacks, Alexander E. Lipka

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Impact of genotype‐calling methodologies on genome‐wide association and genomic prediction in polyploids by Joyce N. Njuguna, Lindsay V. Clark, Alexander E. Lipka, Kossonou G. Anzoua, Larisa Bagmet, Pavel Chebukin, Maria S. Dwiyanti, Elena Dzyubenko, Nicolay Dzyubenko, Bimal Kumar Ghimire, Xiaoli Jin, Douglas A. Johnson, Jens Bonderup Kjeldsen, Hironori Nagano, Ivone deBem Oliveira, Junhua Peng, Karen Koefoed Petersen, Andrey Sabitov, Eun Soo Seong, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Patricio Munoz, Stephen P. Long, Erik J. Sacks

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Current challenges and future of agricultural genomes to phenomes in the USA by Christopher K. Tuggle, Jennifer L. Clarke, Brenda M. Murdoch, Eric Lyons, Nicole M. Scott, Bedrich Beneš, Jacqueline D. Campbell, Henri Chung, Courtney L. Daigle, Sruti Das Choudhury, Jack C. M. Dekkers, Joao R. R. Dórea, David S. Ertl, Max Feldman, Breno O. Fragomeni, Janet E. Fulton, Carmela R. Guadagno, Darren E. Hagen, Andrew S. Hess, Luke M. Kramer, Carolyn J. Lawrence-Dill, Alexander E. Lipka, Thomas Lübberstedt, Fiona M. McCarthy, Stephanie D. McKay, Seth C. Murray, Penny K. Riggs, Troy N. Rowan, Moira J. Sheehan, Juan P. Steibel, Addie M. Thompson, Kara J. Thornton, Curtis P. Van Tassell, Patrick S. Schnable

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