Cell-attribute aware community detection improves differential abundance testing from single-cell RNA-Seq data by Alok K. Maity, Andrew E. Teschendorff

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Systems-epigenomics inference of transcription factor activity implicates aryl-hydrocarbon-receptor inactivation as a key event in lung cancer development by Yuting Chen, Martin Widschwendter, Andrew E. Teschendorff

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Distance covariance entropy reveals primed states and bifurcation dynamics in single-cell RNA-Seq data by Qi Luo, Alok K. Maity, Andrew E. Teschendorff

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Intra-tumour signalling entropy determines clinical outcome in breast and lung cancer. by Christopher R S Banerji, Simone Severini, Carlos Caldas, Andrew E Teschendorff

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Tensorial blind source separation for improved analysis of multi-omic data by Andrew E. Teschendorff, Han Jing, Dirk S. Paul, Joni Virta, Klaus Nordhausen

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Interpretable deep learning of single-cell and epigenetic data reveals novel molecular insights in aging by Zhi-Peng Li, Zhaozhen Du, De-Shuang Huang, Andrew E. Teschendorff

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An improved epigenetic counter to track mitotic age in normal and precancerous tissues by Tianyu Zhu, Huige Tong, Zhaozhen Du, Stephan Beck, Andrew E. Teschendorff

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Elucidating the altered transcriptional programs in breast cancer using independent component analysis. by Andrew E Teschendorff, Michel Journée, Pierre A Absil, Rodolphe Sepulchre, Carlos Caldas

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Longitudinal analysis of epigenome-wide DNA methylation reveals novel loci associated with BMI change in East Asians by Wenran Li, Mingfeng Xia, Hailuan Zeng, Huandong Lin, Andrew E. Teschendorff, Xin Gao, Sijia Wang

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Insights into the role of long non-coding RNAs in DNA methylation mediated transcriptional regulation by Zhen Yang, Feng Xu, Andrew E. Teschendorff, Yi Zhao, Lei Yao, Jian Li, Yungang He, Yungang He

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JAK2-centered interactome hotspot identified by an integrative network algorithm in acute Stanford type A aortic dissection. by Sun Pan, Duojiao Wu, Andrew E Teschendorff, Tao Hong, Linyan Wang, Mengjia Qian, Chunsheng Wang, Xiangdong Wang

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A comparison of epithelial cell content of oral samples estimated using cytology and DNA methylation by Yen Ting Wong, Michael A Tayeb, Timothy C. Stone, Laurence B. Lovat, Andrew E. Teschendorff, Rafal Iwasiow, Jeffrey M Craig

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dbDEMC 3.0: Functional Exploration of Differentially Expressed miRNAs in Cancers of Human and Model Organisms by Feng Xu, Yifan Wang, Yunchao Ling, Chenfen Zhou, Haizhou Wang, Andrew E. Teschendorff, Yi Zhao, Haitao Zhao, Yungang He, Guoqing Zhang, Zhen Yang

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Correction: Universal penalized regression (Elastic-net) model with differentially methylated promoters for oral cancer prediction by Shantanab Das, Saikat Karuri, Joyeeta Chakraborty, Baidehi Basu, Aditi Chandra, S. Aravindan, Anirvan Chakraborty, Debashis Paul, Jay Gopal Ray, Matt Lechner, Stephan Beck, Andrew E. Teschendorff, Raghunath Chatterjee

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Universal penalized regression (Elastic-net) model with differentially methylated promoters for oral cancer prediction by Shantanab Das, Saikat Karuri, Joyeeta Chakraborty, Baidehi Basu, Aditi Chandra, S. Aravindan, Anirvan Chakraborty, Debashis Paul, Jay Gopal Ray, Matt Lechner, Stephan Beck, Andrew E. Teschendorff, Raghunath Chatterjee

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Glioblastoma Stem Cells Respond to Differentiation Cues but Fail to Undergo Commitment and Terminal Cell-Cycle Arrest by Helena Carén, Stefan H. Stricker, Harry Bulstrode, Sladjana Gagrica, Ewan Johnstone, Thomas E. Bartlett, Andrew Feber, Gareth Wilson, Andrew E. Teschendorff, Paul Bertone, Stephan Beck, Steven M. Pollard

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Integrative analysis of genomic and epigenomic regulation reveals miRNA mediated tumor heterogeneity and immune evasion in lower grade glioma by Zhen Yang, Xiaocen Liu, Hao Xu, Andrew E. Teschendorff, Lingjie Xu, Jingyi Li, Minjie Fu, Jun Liu, Hanyu Zhou, Yingying Wang, Licheng Zhang, Yungang He, Kun Lv, Hui Yang

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The dynamics and prognostic potential of DNA methylation changes at stem cell gene loci in women's cancer. by Joanna Zhuang, Allison Jones, Shih-Han Lee, Esther Ng, Heidi Fiegl, Michal Zikan, David Cibula, Alexandra Sargent, Helga B Salvesen, Ian J Jacobs, Henry C Kitchener, Andrew E Teschendorff, Martin Widschwendter

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The potential of circulating tumor DNA methylation analysis for the early detection and management of ovarian cancer by Martin Widschwendter, Michal Zikan, Benjamin Wahl, Harri Lempiäinen, Tobias Paprotka, Iona Evans, Allison Jones, Shohreh Ghazali, Daniel Reisel, Johannes Eichner, Tamas Rujan, Zhen Yang, Andrew E. Teschendorff, Andy Ryan, David Cibula, Usha Menon, Timo Wittenberger

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A meta-analysis of immune-cell fractions at high resolution reveals novel associations with common phenotypes and health outcomes by Qi Luo, Varun B. Dwaraka, Qingwen Chen, Huige Tong, Tianyu Zhu, Kirsten Seale, Joseph M. Raffaele, Shijie C. Zheng, Tavis L. Mendez, Yulu Chen, Natalia Carreras, Sofina Begum, Kevin Mendez, Sarah Voisin, Nir Eynon, Jessica A. Lasky-Su, Ryan Smith, Andrew E. Teschendorff

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