Metabolomics of a neonatal cohort from the Alliance for Maternal and Newborn Health Improvement biorepository: Effect of preanalytical variables on reference intervals. by Lena Jafri, Aysha Habib Khan, Muhammad Ilyas, Imran Nisar, Javairia Khalid, Hafsa Majid, Aneeta Hotwani, Fyezah Jehan

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Experience with the quantitative lytA gene real-time polymerase chain reaction for the detection of Streptococcus pneumoniae from pediatric whole blood in Pakistan by Furqan Kabir, Sahrish Muneer, Adil Kalam, Ana Sami, Shahida Qureshi, Aneeta Hotwani, Atif Riaz, Syed Mohiuddin, Mohammad Tahir Yousafzai, Sara Hussain, Asad Ali, Sadia Shakoor

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Co-carriage of Staphylococcus aureus and Streptococcus pneumoniae among children younger than 2 years of age in a rural population in Pakistan by Shahira Shahid, Muhammad Imran Nisar, Fyezah Jehan, Sheraz Ahmed, Furqan Kabir, Aneeta Hotwani, Sahrish Muneer, Muhammad Farrukh Qazi, Sajid Muhammad, Asad Ali, Anita K.M. Zaidi, Najeeha T. Iqbal

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Methods for estimating the direct and indirect effect of 10 valent pneumococcal vaccine on nasopharyngeal carriage in children under 2 years in Matiari, Pakistan by Muhammad Imran Nisar, Fyezah Jehan, Shahira Shahid, Sadia Shakoor, Furqan Kabir, Aneeta Hotwani, Sahrish Muneer, Sheraz Ahmed, Cynthia Whitney, Asad Ali, Anita KM Zaidi, Saad B Omer, Najeeha Iqbal

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Community-based seroprevalence of SARS CoV-2 in an urban district of Karachi, Pakistan by Muhammad Imran Nisar, Mashal Amin, Nadia Ansari, Farah Khalid, Najeeb Rehman, Aneeta Hotwani, Usma Mehmood, Arslan Memon, Junaid Iqbal, Ali Faisal Saleem, Daniel B. Larremore, Bailey Fosdick, Fyezah Jehan

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Longevity of immune response after a single dose of typhoid conjugate vaccine against Salmonella Typhi among children in Hyderabad, Pakistan by Farah Naz Qamar, Sonia Qureshi, Zoya Haq, Tahir Yousafzai, Ibtisam Qazi, Seema Irfan, Najeeha Iqbal, Zohra Amalik, Aneeta Hotwani, Qumber Ali, Irum Fatima, Najeeb Rahman, Alice S. Carter, Jessica C. Seidman

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The Gut of Healthy Infants in the Community as a Reservoir of ESBL and Carbapenemase-Producing Bacteria by Ali F. Saleem, Ahreen Allana, Lauren Hale, Alondra Diaz, Raul Salinas, Cristina Salinas, Shahida M. Qureshi, Aneeta Hotwani, Najeeb Rahman, Asia Khan, Anita K. Zaidi, Patrick C. Seed, Mehreen Arshad

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Impact of 10-valent Pneumococcal Conjugate Vaccine (PCV10) on nasopharyngeal carriage in children 2 years of age: Data from a four-year time series cross-sectional study from Pakis... by Muhammad Imran Nisar, Shahira Shahid, Sajid Muhammad, Farah Khalid, Amjad Hussain, Sheraz Ahmed, Sadia Shakoor, Furqan Kabir, Aneeta Hotwani, Asad Ali, Anita KM Zaidi, Saad B Omer, Fyezah Jehan, Najeeha Iqbal

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Secondary attack rates and determinants of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) household transmission in Pakistan: A case-ascertained prospective, longitud... by Muhammad Imran Nisar, Nadia Ansari, Mashal Amin, Farah Khalid, Shahira Shahid, Marvi Mahesar, Maryam Mansoor, Muhammad Farrukh Qazi, Aneeta Hotwani, Najeeb Rehman, Arslan Ashraf, Zahoor Ahmed, Ashfaque Ahmed, Arslan Memon, Fyezah Jehan

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Pneumococcal Carriage in Infants Post-PCV10 Introduction in Pakistan: Results from Serial Cross-Sectional Surveys by Shahira Shahid, Amala Khan, Muhammad Imran Nisar, Farah Khalid, Muhammad Farrukh Qazi, Sheraz Ahmed, Furqan Kabir, Aneeta Hotwani, Sahrish Muneer, Syed Asad Ali, Cynthia G. Whitney, Anita K. M. Zaidi, Fyezah Jehan

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Investigation of Japanese encephalitis virus as a cause of acute encephalitis in southern Pakistan, April 2015-January 2018. by Tazeen Fatima, Abida Rais, Erum Khan, Susan L Hills, Trudy V Chambers, Aneeta Hotwani, Shahida Qureshi, Saad Shafquat, Saima Malik, Farah Qamar, Fatima Mir, Anthony A Marfin, Anita Zaidi, Asif Raza Khowaja, Sadia Shakoor

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Correction to: Nasopharyngeal carriage of Streptococcus pneumoniae in children under 5 years of age before introduction of pneumococcal vaccine (PCV10) in urban and rural districts... by Muhammad Imran Nisar, Kanwal Nayani, Tauseef Akhund, Atif Riaz, Omar Irfan, Sadia Shakoor, Sehrish Muneer, Sana Muslim, Aneeta Hotwani, Furqan Kabir, Cynthia Whitney, Lindsay Kim, Velusamy Srinivasan, Asad Ali, Anita K. M. Zaidi, Fyezah Jehan

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Investigation of an extensive outbreak of HIV infection among children in Sindh, Pakistan: protocol for a matched case–control study by Victoria Simms, Rashida Ferrand, Baseer Achakzai, Iqbal Azam, Amna R Siddiqui, Apsara Ali Nathwani, Syed H Abidi, Syed Faisal Mahmood, Sobiya Sawani, Abdul M Kazi, Aneeta Hotwani, Sikander Ali Memon, Jamila Soomro, Saqib Ali Shaikh, Quaid Saeed, Palwasha Khan, Fatima Mir

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Serotype-specific effectiveness against pneumococcal carriage and serotype replacement after ten-valent Pneumococcal Conjugate Vaccine (PCV10) introduction in Pakistan by Muhammad Imran Nisar, Fyezah Jehan, Shahira Shahid, Sheraz Ahmed, Sadia Shakoor, Furqan Kabir, Aneeta Hotwani, Sahrish Muneer, Farah Khalid, Sajid Muhammad, Benjamin M. Althouse, Hao Hu, Cynthia G. Whitney, Asad Ali, Anita K. M. Zaidi, Saad B. Omer, Najeeha Iqbal

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Gut integrity and duodenal enteropathogen burden in undernourished children with environmental enteric dysfunction. by Zehra Jamil, Najeeha Talat Iqbal, Romana Idress, Zubair Ahmed, Kamran Sadiq, Indika Mallawaarachchi, Junaid Iqbal, Sana Syed, Aneeta Hotwani, Furqan Kabir, Kumail Ahmed, Sheraz Ahmed, Fayaz Umrani, Jennie Z Ma, Fatima Aziz, Adil Kalam, Sean R Moore, Syed Asad Ali

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Serotype-specific effectiveness against pneumococcal carriage and serotype replacement after ten-valent Pneumococcal Conjugate Vaccine (PCV10) introduction in Pakistan. by Muhammad Imran Nisar, Fyezah Jehan, Shahira Shahid, Sheraz Ahmed, Sadia Shakoor, Furqan Kabir, Aneeta Hotwani, Sahrish Muneer, Farah Khalid, Sajid Muhammad, Benjamin M Althouse, Hao Hu, Cynthia G Whitney, Asad Ali, Anita K M Zaidi, Saad B Omer, Najeeha Iqbal

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Serial population-based serosurveys for COVID-19 in two neighbourhoods of Karachi, Pakistan by Muhammad Imran Nisar, Nadia Ansari, Farah Khalid, Mashal Amin, Hamna Shahbaz, Aneeta Hotwani, Najeeb Rehman, Sierra Pugh, Usma Mehmood, Arjumand Rizvi, Arslan Memon, Zahoor Ahmed, Ashfaque Ahmed, Junaid Iqbal, Ali Faisal Saleem, Uzma Bashir Aamir, Daniel B. Larremore, Bailey Fosdick, Fyezah Jehan

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Impact of enteropathogens on faltering growth in a resource-limited setting by Furqan Kabir, Junaid Iqbal, Junaid Iqbal, Zehra Jamil, Zehra Jamil, Najeeha Talat Iqbal, Najeeha Talat Iqbal, Indika Mallawaarachchi, Fatima Aziz, Adil Kalam, Sahrish Muneer, Aneeta Hotwani, Sheraz Ahmed, Fayaz Umrani, Sana Syed, Sana Syed, Kamran Sadiq, Jennie Z. Ma, Sean R. Moore, Asad Ali

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Phylogenetic and Drug-Resistance Analysis of HIV-1 Sequences From an Extensive Paediatric HIV-1 Outbreak in Larkana, Pakistan by Syed Hani Abidi, George Makau Nduva, George Makau Nduva, Dilsha Siddiqui, Wardah Rafaqat, Syed Faisal Mahmood, Amna Rehana Siddiqui, Apsara Ali Nathwani, Aneeta Hotwani, Sharaf Ali Shah, Sikander Memon, Saqib Ali Sheikh, Palwasha Khan, Joakim Esbjörnsson, Joakim Esbjörnsson, Rashida Abbas Ferrand, Rashida Abbas Ferrand, Fatima Mir

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A shared group of bacterial taxa in the duodenal microbiota of undernourished Pakistani children with environmental enteric dysfunction by Najeeha T. Iqbal, Robert Y. Chen, Nicholas W. Griffin, Matthew C. Hibberd, Aqsa Khalid, Kamran Sadiq, Zehra Jamil, Kumail Ahmed, Junaid Iqbal, Aneeta Hotwani, Furqan Kabir, Najeeb Rahman, Arjumand Rizvi, Romana Idress, Zubair Ahmed, Sheraz Ahmed, Fayaz Umrani, Sana Syed, Sean R. Moore, Asad Ali, Michael J. Barratt, Jeffrey I. Gordon

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