Showing 1 - 20 results of 21 for search 'Anna R Panchenko', query time: 0.07s Refine Results
  1. 1
    Structural and functional roles of coevolved sites in proteins.

    Structural and functional roles of coevolved sites in proteins. by Saikat Chakrabarti, Anna R Panchenko

    Published 2010-01-01
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  2. 2
    Deciphering protein-protein interactions. Part II. Computational methods to predict protein and domain interaction partners.

    Deciphering protein-protein interactions. Part II. Computational methods to predict protein and domain interaction partners. by Benjamin A Shoemaker, Anna R Panchenko

    Published 2007-04-01
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  3. 3
    Deciphering protein-protein interactions. Part I. Experimental techniques and databases.

    Deciphering protein-protein interactions. Part I. Experimental techniques and databases. by Benjamin A Shoemaker, Anna R Panchenko

    Published 2007-03-01
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  4. 4
    Histone variant H2A.Z modulates nucleosome dynamics to promote DNA accessibility

    Histone variant H2A.Z modulates nucleosome dynamics to promote DNA accessibility by Shuxiang Li, Tiejun Wei, Anna R. Panchenko

    Published 2023-02-01
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  5. 5
    Physicochemical mechanisms of protein regulation by phosphorylation

    Physicochemical mechanisms of protein regulation by phosphorylation by Hafumi eNishi, Alexey eShaytan, Anna R. Panchenko

    Published 2014-08-01
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  6. 6
    Finding driver mutations in cancer: Elucidating the role of background mutational processes.

    Finding driver mutations in cancer: Elucidating the role of background mutational processes. by Anna-Leigh Brown, Minghui Li, Alexander Goncearenco, Anna R Panchenko

    Published 2019-04-01
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  7. 7
    Binding of regulatory proteins to nucleosomes is modulated by dynamic histone tails

    Binding of regulatory proteins to nucleosomes is modulated by dynamic histone tails by Yunhui Peng, Shuxiang Li, Alexey Onufriev, David Landsman, Anna R. Panchenko

    Published 2021-09-01
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  8. 8
    Data sets on human histone interaction networks

    Data sets on human histone interaction networks by Yunhui Peng, Yaroslav Markov, Alexander Goncearenco, David Landsman, Anna R. Panchenko

    Published 2020-12-01
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  9. 9
    Detection of new pioneer transcription factors as cell-type-specific nucleosome binders

    Detection of new pioneer transcription factors as cell-type-specific nucleosome binders by Yunhui Peng, Wei Song, Vladimir B Teif, Ivan Ovcharenko, David Landsman, Anna R Panchenko

    Published 2024-01-01
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  10. 10
    Homology inference of protein-protein interactions via conserved binding sites.

    Homology inference of protein-protein interactions via conserved binding sites. by Manoj Tyagi, Ratna R Thangudu, Dachuan Zhang, Stephen H Bryant, Thomas Madej, Anna R Panchenko

    Published 2012-01-01
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  11. 11
    Trajectories of microsecond molecular dynamics simulations of nucleosomes and nucleosome core particles

    Trajectories of microsecond molecular dynamics simulations of nucleosomes and nucleosome core particles by Alexey K. Shaytan, Grigoriy A. Armeev, Alexander Goncearenco, Victor B. Zhurkin, David Landsman, Anna R. Panchenko

    Published 2016-06-01
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  12. 12
    MutaBind2: Predicting the Impacts of Single and Multiple Mutations on Protein-Protein Interactions

    MutaBind2: Predicting the Impacts of Single and Multiple Mutations on Protein-Protein Interactions by Ning Zhang, Yuting Chen, Haoyu Lu, Feiyang Zhao, Roberto Vera Alvarez, Alexander Goncearenco, Anna R. Panchenko, Minghui Li

    Published 2020-03-01
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  13. 13
    Cancer missense mutations alter binding properties of proteins and their interaction networks.

    Cancer missense mutations alter binding properties of proteins and their interaction networks. by Hafumi Nishi, Manoj Tyagi, Shaolei Teng, Benjamin A Shoemaker, Kosuke Hashimoto, Emil Alexov, Stefan Wuchty, Anna R Panchenko

    Published 2013-01-01
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  14. 14
    Intrinsic disorder in protein interactions: insights from a comprehensive structural analysis.

    Intrinsic disorder in protein interactions: insights from a comprehensive structural analysis. by Jessica H Fong, Benjamin A Shoemaker, Sergiy O Garbuzynskiy, Michail Y Lobanov, Oxana V Galzitskaya, Anna R Panchenko

    Published 2009-03-01
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  15. 15
    Histone Octamer Structure Is Altered Early in ISW2 ATP-Dependent Nucleosome Remodeling

    Histone Octamer Structure Is Altered Early in ISW2 ATP-Dependent Nucleosome Remodeling by Arjan Hada, Swetansu K. Hota, Jie Luo, Yuan-chi Lin, Seyit Kale, Alexey K. Shaytan, Saurabh K. Bhardwaj, Jim Persinger, Jeff Ranish, Anna R. Panchenko, Blaine Bartholomew

    Published 2019-07-01
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  16. 16
    DNA polymerase ε and δ variants drive mutagenesis in polypurine tracts in human tumors

    DNA polymerase ε and δ variants drive mutagenesis in polypurine tracts in human tumors by Daria Ostroverkhova, Kathrin Tyryshkin, Annette K. Beach, Elizabeth A. Moore, Yosef Masoudi-Sobhanzadeh, Stephanie R. Barbari, Igor B. Rogozin, Konstantin V. Shaitan, Anna R. Panchenko, Polina V. Shcherbakova

    Published 2024-01-01
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  17. 17
    A standardized nomenclature for mammalian histone genes

    A standardized nomenclature for mammalian histone genes by Ruth L. Seal, Paul Denny, Elspeth A. Bruford, Anna K. Gribkova, David Landsman, William F. Marzluff, Monica McAndrews, Anna R. Panchenko, Alexey K. Shaytan, Paul B. Talbert

    Published 2022-10-01
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  18. 18
    Survivin prevents the polycomb repressor complex 2 from methylating histone 3 lysine 27

    Survivin prevents the polycomb repressor complex 2 from methylating histone 3 lysine 27 by Maja Jensen, Venkataragavan Chandrasekaran, María-José García-Bonete, Shuxiang Li, Atsarina Larasati Anindya, Karin Andersson, Malin C. Erlandsson, Nina Y. Oparina, Björn M. Burmann, Ulrika Brath, Anna R. Panchenko, Maria Bokarewa I., Gergely Katona

    Published 2023-07-01
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  19. 19
    DNA Methylation, Deamination, and Translesion Synthesis Combine to Generate Footprint Mutations in Cancer Driver Genes in B-Cell Derived Lymphomas and Other Cancers

    DNA Methylation, Deamination, and Translesion Synthesis Combine to Generate Footprint Mutations in Cancer Driver Genes in B-Cell Derived Lymphomas and Other Cancers by Igor B. Rogozin, Abiel Roche-Lima, Kathrin Tyryshkin, Kelvin Carrasquillo-Carrión, Artem G. Lada, Lennard Y. Poliakov, Elena Schwartz, Andreu Saura, Vyacheslav Yurchenko, Vyacheslav Yurchenko, David N. Cooper, Anna R. Panchenko, Youri I. Pavlov, Youri I. Pavlov, Youri I. Pavlov

    Published 2021-05-01
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  20. 20
    APOBEC Mutagenesis and Copy-Number Alterations Are Drivers of Proteogenomic Tumor Evolution and Heterogeneity in Metastatic Thoracic Tumors

    APOBEC Mutagenesis and Copy-Number Alterations Are Drivers of Proteogenomic Tumor Evolution and Heterogeneity in Metastatic Thoracic Tumors by Nitin Roper, Shaojian Gao, Tapan K. Maity, A. Rouf Banday, Xu Zhang, Abhilash Venugopalan, Constance M. Cultraro, Rajesh Patidar, Sivasish Sindiri, Anna-Leigh Brown, Alexander Goncearenco, Anna R. Panchenko, Romi Biswas, Anish Thomas, Arun Rajan, Corey A. Carter, David E. Kleiner, Stephen M. Hewitt, Javed Khan, Ludmila Prokunina-Olsson, Udayan Guha

    Published 2019-03-01
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