Chromosomal periodicity and positional networks of genes in Escherichia coli 著者: Anthony Mathelier, Alessandra Carbone

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The next generation of transcription factor binding site prediction. 著者: Anthony Mathelier, Wyeth W Wasserman

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Super-enhancers are transcriptionally more active and cell type-specific than stretch enhancers 著者: Aziz Khan, Anthony Mathelier, Xuegong Zhang

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MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions 著者: Roberto Rossini, Vipin Kumar, Anthony Mathelier, Torbjørn Rognes, Jonas Paulsen

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UniBind: maps of high-confidence direct TF-DNA interactions across nine species 著者: Rafael Riudavets Puig, Paul Boddie, Aziz Khan, Jaime Abraham Castro-Mondragon, Anthony Mathelier

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Integrative pan-cancer analysis reveals a common architecture of dysregulated transcriptional networks characterized by loss of enhancer methylation. 著者: Jørgen Ankill, Zhi Zhao, Xavier Tekpli, Elin H Kure, Vessela N Kristensen, Anthony Mathelier, Thomas Fleischer

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Pioneer transcription factors are associated with the modulation of DNA methylation patterns across cancers 著者: Roza Berhanu Lemma, Thomas Fleischer, Emily Martinsen, Marit Ledsaak, Vessela Kristensen, Ragnhild Eskeland, Odd Stokke Gabrielsen, Anthony Mathelier

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Characterization of the human RFX transcription factor family by regulatory and target gene analysis 著者: Debora Sugiaman-Trapman, Morana Vitezic, Eeva-Mari Jouhilahti, Anthony Mathelier, Gilbert Lauter, Sougat Misra, Carsten O. Daub, Juha Kere, Peter Swoboda

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Crosstalk between microRNA expression and DNA methylation drives the hormone-dependent phenotype of breast cancer 著者: Miriam Ragle Aure, Thomas Fleischer, Sunniva Bjørklund, Jørgen Ankill, Jaime A. Castro-Mondragon, OSBREAC, Anne-Lise Børresen-Dale, Jörg Tost, Kristine K. Sahlberg, Anthony Mathelier, Xavier Tekpli, Vessela N. Kristensen

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Subtype and cell type specific expression of lncRNAs provide insight into breast cancer 著者: Sunniva Stordal Bjørklund, Miriam Ragle Aure, Jari Häkkinen, Johan Vallon-Christersson, Surendra Kumar, Katrine Bull Evensen, Thomas Fleischer, Jörg Tost, OSBREAC, Kristine K. Sahlberg, Anthony Mathelier, Gyan Bhanot, Shridar Ganesan, Xavier Tekpli, Vessela N. Kristensen

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DNA methylation at enhancers identifies distinct breast cancer lineages 著者: Thomas Fleischer, Xavier Tekpli, Anthony Mathelier, Shixiong Wang, Daniel Nebdal, Hari P. Dhakal, Kristine Kleivi Sahlberg, Ellen Schlichting, Oslo Breast Cancer Research Consortium (OSBREAC), Anne-Lise Børresen-Dale, Elin Borgen, Bjørn Naume, Ragnhild Eskeland, Arnoldo Frigessi, Jörg Tost, Antoni Hurtado, Vessela N. Kristensen

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PAX6 MiniPromoters drive restricted expression from rAAV in the adult mouse retina 著者: Jack W Hickmott, Chih-yu Chen, David J Arenillas, Andrea J Korecki, Siu Ling Lam, Laurie L Molday, Russell J Bonaguro, Michelle Zhou, Alice Y Chou, Anthony Mathelier, Sanford L Boye, William W Hauswirth, Robert S Molday, Wyeth W Wasserman, Elizabeth M Simpson

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Identification of novel cerebellar developmental transcriptional regulators with motif activity analysis 著者: Thomas J. Ha, Peter G. Y. Zhang, Remi Robert, Joanna Yeung, Douglas J. Swanson, Anthony Mathelier, Wyeth W. Wasserman, Sujin Im, Masayoshi Itoh, Hideya Kawaji, Timo Lassmann, Carsten O. Daub, Erik Arner, The FANTOM Consortium, Piero Carninci, Yoshihide Hayashizaki, Alistair R. R. Forrest, Daniel Goldowitz

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DeepCAGE Transcriptomics Reveal an Important Role of the Transcription Factor MAFB in the Lymphatic Endothelium 著者: Lothar C. Dieterich, Sarah Klein, Anthony Mathelier, Adriana Sliwa-Primorac, Qiaoli Ma, Young-Kwon Hong, Jay W. Shin, Michito Hamada, Marina Lizio, Masayoshi Itoh, Hideya Kawaji, Timo Lassmann, Carsten O. Daub, Erik Arner, Piero Carninci, Yoshihide Hayashizaki, Alistair R.R. Forrest, Wyeth W. Wasserman, Michael Detmar

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