Stochastic Inheritance of Division and Death Times Determines the Size and Phenotype of CD8+ T Cell Families by Aridaman Pandit, Aridaman Pandit, Aridaman Pandit, Rob J. De Boer

Get full text

Enrichment of SARS-CoV-2 Entry Factors and Interacting Intracellular Genes in Tissue and Circulating Immune Cells by Abhinandan Devaprasad, Aridaman Pandit

Get full text

Differential trends in the codon usage patterns in HIV-1 genes. by Aridaman Pandit, Somdatta Sinha

Get full text

Integration of Immunome With Disease-Gene Network Reveals Common Cellular Mechanisms Between IMIDs and Drug Repurposing Strategies by Abhinandan Devaprasad, Abhinandan Devaprasad, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Aridaman Pandit, Aridaman Pandit

Get full text

Parameter optimization for stable clustering using FlowSOM: a case study from CyTOF by Weiyang Tao, Anirban Sinha, Khadir Raddassi, Aridaman Pandit

Get full text

RegEnrich gene regulator enrichment analysis reveals a key role of the ETS transcription factor family in interferon signaling by Weiyang Tao, Timothy R. D. J. Radstake, Aridaman Pandit

Get full text

Finding Gene Regulatory Networks in Psoriasis: Application of a Tree-Based Machine Learning Approach by Jingwen Deng, Jingwen Deng, Carlotta Schieler, José A. M. Borghans, Chuanjian Lu, Aridaman Pandit

Get full text

Unraveling IFN-I response dynamics and TNF crosstalk in the pathophysiology of systemic lupus erythematosus by Laura C. Van Eyndhoven, Laura C. Van Eyndhoven, Eleni Chouri, Eleni Chouri, Catarina I. Matos, Catarina I. Matos, Aridaman Pandit, Aridaman Pandit, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Jasper C. A. Broen, Abhyudai Singh, Jurjen Tel, Jurjen Tel

Get full text

Transcriptome Analysis of CCR9+ T Helper Cells From Primary Sjögren’s Syndrome Patients Identifies CCL5 as a Novel Effector Molecule by Anneline C. Hinrichs, Anneline C. Hinrichs, Sofie L. M. Blokland, Sofie L. M. Blokland, Ana P. Lopes, Ana P. Lopes, Catharina G. K. Wichers, Catharina G. K. Wichers, Aike A. Kruize, Aridaman Pandit, Aridaman Pandit, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Joel A. G. van Roon, Joel A. G. van Roon

Get full text

Multi‐omics integration reveals a core network involved in host defence and hyperkeratinization in psoriasis by Jingwen Deng, Emmerik Leijten, Michel Olde Nordkamp, Guangjuan Zheng, Juliëtte Pouw, Weiyang Tao, Sarita Hartgring, Deepak Balak, Rianne Rijken, Runyue Huang, Timothy Radstake, Chuanjian Lu, Aridaman Pandit

Get full text

The Transcriptomic Profile of Monocytes from Patients With Sjögren’s Syndrome Is Associated With Inflammatory Parameters and Is Mimicked by Circulating Mediators by Ana P. Lopes, Ana P. Lopes, Cornelis P. J. Bekker, Cornelis P. J. Bekker, Maarten R. Hillen, Maarten R. Hillen, Sofie L. M. Blokland, Sofie L. M. Blokland, Anneline C. Hinrichs, Anneline C. Hinrichs, Aridaman Pandit, Aridaman Pandit, Aike A. Kruize, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Joel A. G. van Roon, Joel A. G. van Roon

Get full text

Autoantigen TRIM21/Ro52 is expressed on the surface of antigen-presenting cells and its enhanced expression in Sjögren’s syndrome is associated with B cell hyperactivity and type I... by Timothy R D J Radstake, Joel A G van Roon, Maarten R Hillen, Sofie L M Blokland, Aridaman Pandit, Katia Urso, Emma Koppe, Ana Pinheiro Lopes, Tom Slocombe, André van Maurik

Get full text

Compartmentalization and persistence of dominant (regulatory) T cell clones indicates antigen skewing in juvenile idiopathic arthritis by Gerdien Mijnheer, Nila Hendrika Servaas, Jing Yao Leong, Arjan Boltjes, Eric Spierings, Phyllis Chen, Liyun Lai, Alessandra Petrelli, Sebastiaan Vastert, Rob J de Boer, Salvatore Albani, Aridaman Pandit, Femke van Wijk

Get full text

Salivary gland secretome: a novel tool towards molecular stratification of patients with primary Sjögren’s syndrome and non-autoimmune sicca by Timothy R D J Radstake, Joel A G van Roon, Maarten R Hillen, Sofie L M Blokland, Aike A Kruize, Fréderique M van Vliet-Moret, Angela Bikker, Wilco de Jager, Aridaman Pandit

Get full text

CXCL4 Links Inflammation and Fibrosis by Reprogramming Monocyte-Derived Dendritic Cells in vitro by Sandra C. Silva-Cardoso, Sandra C. Silva-Cardoso, Weiyang Tao, Weiyang Tao, Chiara Angiolilli, Chiara Angiolilli, Ana P. Lopes, Ana P. Lopes, Cornelis P. J. Bekker, Cornelis P. J. Bekker, Abhinandan Devaprasad, Abhinandan Devaprasad, Barbara Giovannone, Jaap van Laar, Marta Cossu, Marta Cossu, Wioleta Marut, Wioleta Marut, Erik Hack, Rob J. de Boer, Marianne Boes, Marianne Boes, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Aridaman Pandit, Aridaman Pandit

Get full text

Transcriptome network analysis implicates CX3CR1-positive type 3 dendritic cells in non-infectious uveitis by Sanne Hiddingh, Aridaman Pandit, Fleurieke Verhagen, Rianne Rijken, Nila Hendrika Servaas, Rina CGK Wichers, Ninette H ten Dam-van Loon, Saskia M Imhof, Timothy RDJ Radstake, Joke H de Boer, Jonas JW Kuiper

Get full text

High-Dimensional Profiling Reveals Heterogeneity of the Th17 Subset and Its Association With Systemic Immunomodulatory Treatment in Non-infectious Uveitis by Fleurieke H. Verhagen, Fleurieke H. Verhagen, Fleurieke H. Verhagen, Sanne Hiddingh, Sanne Hiddingh, Rianne Rijken, Aridaman Pandit, Aridaman Pandit, Emmerik Leijten, Emmerik Leijten, Michel Olde Nordkamp, Ninette H. ten Dam-van Loon, Stefan Nierkens, Saskia M. Imhof, Joke H. de Boer, Joke H. de Boer, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Jonas J. W. Kuiper, Jonas J. W. Kuiper, Jonas J. W. Kuiper

Get full text

Plasmacytoid DCs From Patients With Sjögren's Syndrome Are Transcriptionally Primed for Enhanced Pro-inflammatory Cytokine Production by Maarten R. Hillen, Maarten R. Hillen, Aridaman Pandit, Aridaman Pandit, Sofie L. M. Blokland, Sofie L. M. Blokland, Sarita A. Y. Hartgring, Sarita A. Y. Hartgring, Cornelis P. J. Bekker, Cornelis P. J. Bekker, Eefje H. M. van der Heijden, Eefje H. M. van der Heijden, Nila H. Servaas, Nila H. Servaas, Marzia Rossato, Marzia Rossato, Marzia Rossato, Aike A. Kruize, Joel A. G. van Roon, Joel A. G. van Roon, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake

Get full text

Conserved human effector Treg cell transcriptomic and epigenetic signature in arthritic joint inflammation by Gerdien Mijnheer, Lisanne Lutter, Michal Mokry, Marlot van der Wal, Rianne Scholman, Veerle Fleskens, Aridaman Pandit, Weiyang Tao, Mark Wekking, Stephin Vervoort, Ceri Roberts, Alessandra Petrelli, Janneke G. C. Peeters, Marthe Knijff, Sytze de Roock, Sebastiaan Vastert, Leonie S. Taams, Jorg van Loosdregt, Femke van Wijk

Get full text

Whole Transcriptome Analysis Reveals Heterogeneity in B Cell Memory Populations in Patients With Juvenile Idiopathic Arthritis-Associated Uveitis by Roos A. W. Wennink, Roos A. W. Wennink, Aridaman Pandit, Anne-Mieke J. W. Haasnoot, Anne-Mieke J. W. Haasnoot, Sanne Hiddingh, Viera Kalinina Ayuso, Nico M. Wulffraat, Bas J. Vastert, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Joke H. de Boer, Jonas J. W. Kuiper, Jonas J. W. Kuiper

Get full text