Epidemiological Trends of Five Common Diarrhea-Associated Enteric Viruses Pre- and Post-Rotavirus Vaccine Introduction in Coastal Kenya by Arnold W. Lambisia, Sylvia Onchaga, Nickson Murunga, Clement S. Lewa, Steven Ger Nyanjom, Charles N. Agoti

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Temporal changes in the positivity rate of common enteric viruses among paediatric admissions in coastal Kenya, during the COVID-19 pandemic, 2019–2022 by Arnold W. Lambisia, Nickson Murunga, Martin Mutunga, Robinson Cheruiyot, Grace Maina, Timothy O. Makori, D. James Nokes, Charles N. Agoti

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Differences in epidemiology of enteropathogens in children pre- and post-rotavirus vaccine introduction in Kilifi, coastal Kenya by Charles N. Agoti, Martin D. Curran, Nickson Murunga, Moses Ngari, Esther Muthumbi, Arnold W. Lambisia, Simon D. W. Frost, Barbara A. Blacklaws, D. James Nokes, Lydia N. Drumright

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New SARS-CoV-2 Omicron Variant with Spike Protein Mutation Y451H, Kilifi, Kenya, March–May 2023 by Mike J. Mwanga, Arnold W. Lambisia, John Mwita Morobe, Nickson Murunga, Edidah Moraa, Leonard Ndwiga, Robinson Cheruiyot, Jennifer Musyoki, Martin Mutunga, Laura M. Guzman-Rincon, Charles Sande, Joseph Mwangangi, Philip Bejon, Lynette Isabella Ochola-Oyier, D. James Nokes, Charles N. Agoti, Joyce Nyiro, George Githinji

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Optimization of the SARS-CoV-2 ARTIC Network V4 Primers and Whole Genome Sequencing Protocol by Arnold W. Lambisia, Khadija S. Mohammed, Timothy O. Makori, Leonard Ndwiga, Maureen W. Mburu, John M. Morobe, Edidah O. Moraa, Jennifer Musyoki, Nickson Murunga, Jane N. Mwangi, D. James Nokes, D. James Nokes, Charles N. Agoti, Charles N. Agoti, Lynette Isabella Ochola-Oyier, Lynette Isabella Ochola-Oyier, George Githinji, George Githinji

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Transmission networks of SARS-CoV-2 in Coastal Kenya during the first two waves: A retrospective genomic study by Charles N Agoti, Lynette Isabella Ochola-Oyier, Simon Dellicour, Khadija Said Mohammed, Arnold W Lambisia, Zaydah R de Laurent, John M Morobe, Maureen W Mburu, Donwilliams O Omuoyo, Edidah M Ongera, Leonard Ndwiga, Eric Maitha, Benson Kitole, Thani Suleiman, Mohamed Mwakinangu, John K Nyambu, John Otieno, Barke Salim, Jennifer Musyoki, Nickson Murunga, Edward Otieno, John N Kiiru, Kadondi Kasera, Patrick Amoth, Mercy Mwangangi, Rashid Aman, Samson Kinyanjui, George Warimwe, My Phan, Ambrose Agweyu, Matthew Cotten, Edwine Barasa, Benjamin Tsofa, D James Nokes, Philip Bejon, George Githinji

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Genomic Epidemiology of SARS-CoV-2 in Seychelles, 2020–2021 by John Mwita Morobe, Brigitte Pool, Lina Marie, Dwayne Didon, Arnold W. Lambisia, Timothy Makori, Khadija Said Mohammed, Zaydah R. de Laurent, Leonard Ndwiga, Maureen W. Mburu, Edidah Moraa, Nickson Murunga, Jennifer Musyoki, Jedida Mwacharo, Lydia Nyamako, Debra Riako, Pariken Ephnatus, Faith Gambo, Josephine Naimani, Joyce Namulondo, Susan Zimba Tembo, Edwin Ogendi, Thierno Balde, Fred Athanasius Dratibi, Ali Ahmed Yahaya, Nicksy Gumede, Rachel A. Achilla, Peter K. Borus, Dorcas W. Wanjohi, Sofonias K. Tessema, Joseph Mwangangi, Philip Bejon, David J. Nokes, Lynette Isabella Ochola-Oyier, George Githinji, Leon Biscornet, Charles N. Agoti

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Pooled testing conserves SARS-CoV-2 laboratory resources and improves test turn-around time: experience on the Kenyan Coast [version 1; peer review: 3 approved] by Charles N. Agoti, Martin Mutunga, Arnold W. Lambisia, Domtila Kimani, Robinson Cheruiyot, Patience Kiyuka, Clement Lewa, Elijah Gicheru, Metrine Tendwa, Khadija Said Mohammed, Victor Osoti, Johnstone Makale, Brian Tawa, Calleb Odundo, Wesley Cheruiyot, Wilfred Nyamu, Wilson Gumbi, Jedidah Mwacharo, Lydia Nyamako, Edward Otieno, David Amadi, Janet Thoya, Angela Karani, Daisy Mugo, Jennifer Musyoki, Horace Gumba, Salim Mwarumba, Bonface M. Gichuki, Susan Njuguna, Debra Riako, Shadrack Mutua, John N. Gitonga, Yiakon Sein, Brian Bartilol, Shaban J. Mwangi, Donwilliams O. Omuoyo, John M. Morobe, Zaydah R. de Laurent, Philip Bejon, Lynette Isabella Ochola-Oyier, Benjamin Tsofa

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An optimization of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams [version 2; peer review: 2 approved] by Shadrack Mutua, Brian Bartilol, Shaban J. Mwangi, Debra Riako, Lydia Nyamako, Bonface M. Gichuki, Henry Karanja, Angela Karani, John N. Gitonga, Daisy Mugo, Brian Tawa, Wilson Gumbi, Wesley Cheruiyot, Metrine Tendwa, John K. Nyambu, Yiakon Sein, Thani Suleiman Thani, Shem O. Patta, Benson Kitole, Eric K. Maitha, Barke S. Muslih, Mohamed S. Mwakinangu, Philip Bejon, Benjamin Tsofa, Joyce U. Nyiro, John Ochieng Otieno, Leonard Ndwiga, Patience Kiyuka, Johnstone Makale, Kevin Wamae, Victor Osoti, John Mwita Morobe, Calleb Odundo, Arnold W. Lambisia, Martin Mutunga, Salim Mwarumba, Lynette Isabella Ochola-Oyier, Charles N. Agoti, Clement Lewa, Elijah Gicheru, Jennifer Musyoki, Susan Njuguna, Horace Gumba, Domtila Kimani, Jedidah Mwacharo, Zaydah R. de Laurent, Khadija Said Mohammed, Robinson Cheruiyot, Donwilliams O. Omuoyo

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Maintaining laboratory quality assurance and safety in a pandemic: Experiences from the KEMRI-Wellcome Trust Research Programme laboratory’s COVID-19 response [version 2; peer revi... by Shadrack Mutua, Brian Bartilol, Debra Riako, Lydia Nyamako, Angela Karani, Daisy Mugo, Brian Tawa, Michael Opiyo, Wesley Cheruiyot, Metrine Tendwa, Oscar Kai, Caroline Ngetsa, Yiakon Sein, Nelson Ouma, Arnold W. Lambisia, Bonface M. Gichuki, Boniface Karia, John M. Morobe, Shaban Mwangi, Benjamin Tsofa, Philip Bejon, Alfred Mwakubia, Fredrick Mitsanze, Kelly Ominde, Patience Kiyuka, Martin Rono, Johnstone Makale, Agnes Mutiso, Perpetual Wanjiku, Victor Osoti, John N. Gitonga, Alfred Mwanzu, Calleb Odundo, Martin Mutunga, Salim Mwarumba, Donwilliams O. Omuoyo, Amek Nyaguara, Clement Lewa, Elijah Gicheru, Wilson Gumbi, Jennifer Musyoki, Susan Njuguna, Moses Mosobo, Lynette Isabella Ochola-Oyier, Horace Gumba, Wilfred Nyamu, Khadija Said Mohammed, Janet Thoya, Edward Otieno, Domtila Kimani, Jedidah Mwacharo, David Amadi, Charles N. Agoti, Zaydah R. de Laurent, Robinson Cheruiyot

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