Arup Chakraborty

Arup K. Chakraborty is an American engineer, focusing in biophysics, computational modeling and infectious disease, currently the Robert T. Haslam Professor at Massachusetts Institute of Technology and formerly the Warren and Katherine Schlinger Distinguished Professor at University of California, Berkeley. Provided by Wikipedia
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  1. 1
    A Population Dynamics Model for Clonal Diversity in a Germinal Center

    A Population Dynamics Model for Clonal Diversity in a Germinal Center by Assaf Amitai, Assaf Amitai, Assaf Amitai, Luka Mesin, Gabriel D. Victora, Mehran Kardar, Arup K. Chakraborty, Arup K. Chakraborty, Arup K. Chakraborty, Arup K. Chakraborty

    Published 2017-09-01
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  2. 2
    Design of immunogens for eliciting antibody responses that may protect against SARS-CoV-2 variants.

    Design of immunogens for eliciting antibody responses that may protect against SARS-CoV-2 variants. by Eric Wang, Arup K Chakraborty

    Published 2022-09-01
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  3. 3
    Stochastic responses may allow genetically diverse cell populations to optimize performance with simpler signaling networks.

    Stochastic responses may allow genetically diverse cell populations to optimize performance with simpler signaling networks. by Christopher C Govern, Arup K Chakraborty

    Published 2013-01-01
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  4. 4
    Regulation of signal duration and the statistical dynamics of kinase activation by scaffold proteins.

    Regulation of signal duration and the statistical dynamics of kinase activation by scaffold proteins. by Jason W Locasale, Arup K Chakraborty

    Published 2008-06-01
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  5. 5
    Signaling cascades modulate the speed of signal propagation through space.

    Signaling cascades modulate the speed of signal propagation through space. by Christopher C Govern, Arup K Chakraborty

    Published 2009-01-01
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  6. 6
    The low spike density of HIV may have evolved because of the effects of T helper cell depletion on affinity maturation.

    The low spike density of HIV may have evolved because of the effects of T helper cell depletion on affinity maturation. by Assaf Amitai, Arup K Chakraborty, Mehran Kardar

    Published 2018-08-01
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  7. 7
    Correction: Protein Clusters on the T Cell Surface May Suppress Spurious Early Signaling Events.

    Correction: Protein Clusters on the T Cell Surface May Suppress Spurious Early Signaling Events. by Woo Chung, Steven M. Abel, Arup K. Chakraborty

    Published 2012-01-01
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  8. 8
    A model for genetic and epigenetic regulatory networks identifies rare pathways for transcription factor induced pluripotency.

    A model for genetic and epigenetic regulatory networks identifies rare pathways for transcription factor induced pluripotency. by Maxim N Artyomov, Alexander Meissner, Arup K Chakraborty

    Published 2010-05-01
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  9. 9
    A model for how signal duration can determine distinct outcomes of gene transcription programs.

    A model for how signal duration can determine distinct outcomes of gene transcription programs. by Kevin D Fowler, Vijay K Kuchroo, Arup K Chakraborty

    Published 2012-01-01
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  10. 10
    A model for organization and regulation of nuclear condensates by gene activity

    A model for organization and regulation of nuclear condensates by gene activity by Halima H. Schede, Pradeep Natarajan, Arup K. Chakraborty, Krishna Shrinivas

    Published 2023-07-01
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  11. 11
    Theory, models and biology

    Theory, models and biology by Wenying Shou, Carl T Bergstrom, Arup K Chakraborty, Frances K Skinner

    Published 2015-07-01
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  12. 12
    Mechanisms that promote the evolution of cross-reactive antibodies upon vaccination with designed influenza immunogens

    Mechanisms that promote the evolution of cross-reactive antibodies upon vaccination with designed influenza immunogens by Leerang Yang, Timothy M. Caradonna, Aaron G. Schmidt, Arup K. Chakraborty

    Published 2023-03-01
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  13. 13
    Role of framework mutations and antibody flexibility in the evolution of broadly neutralizing antibodies

    Role of framework mutations and antibody flexibility in the evolution of broadly neutralizing antibodies by Victor Ovchinnikov, Joy E Louveau, John P Barton, Martin Karplus, Arup K Chakraborty

    Published 2018-02-01
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  14. 14
    Directed migration of positively selected thymocytes visualized in real time.

    Directed migration of positively selected thymocytes visualized in real time. by Colleen M Witt, Subhadip Raychaudhuri, Brian Schaefer, Arup K Chakraborty, Ellen A Robey

    Published 2005-06-01
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  15. 15
    Correction: Directed Migration of Positively Selected Thymocytes Visualized in Real Time.

    Correction: Directed Migration of Positively Selected Thymocytes Visualized in Real Time. by Colleen M Witt, Subhadip Raychaudhuri, Brian Schaefer, Arup K Chakraborty, Ellen A Robey

    Published 2005-10-01
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  16. 16
    Affinity Inequality among Serum Antibodies That Originate in Lymphoid Germinal Centers.

    Affinity Inequality among Serum Antibodies That Originate in Lymphoid Germinal Centers. by Myungsun Kang, Timothy J Eisen, Ellen A Eisen, Arup K Chakraborty, Herman N Eisen

    Published 2015-01-01
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  17. 17
    Multiscale affinity maturation simulations to elicit broadly neutralizing antibodies against HIV

    Multiscale affinity maturation simulations to elicit broadly neutralizing antibodies against HIV by Simone Conti, Victor Ovchinnikov, Jonathan G. Faris, Arup K. Chakraborty, Martin Karplus, Kayla G. Sprenger

    Published 2022-04-01
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  18. 18
    Computational prediction of broadly neutralizing HIV-1 antibody epitopes from neutralization activity data.

    Computational prediction of broadly neutralizing HIV-1 antibody epitopes from neutralization activity data. by Andrew L Ferguson, Emilia Falkowska, Laura M Walker, Michael S Seaman, Dennis R Burton, Arup K Chakraborty

    Published 2013-01-01
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  19. 19
    Relative rate and location of intra-host HIV evolution to evade cellular immunity are predictable

    Relative rate and location of intra-host HIV evolution to evade cellular immunity are predictable by John P. Barton, Nilu Goonetilleke, Thomas C. Butler, Bruce D. Walker, Andrew J. McMichael, Arup K. Chakraborty

    Published 2016-05-01
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  20. 20
    Predominance of positive epistasis among drug resistance-associated mutations in HIV-1 protease.

    Predominance of positive epistasis among drug resistance-associated mutations in HIV-1 protease. by Tian-Hao Zhang, Lei Dai, John P Barton, Yushen Du, Yuxiang Tan, Wenwen Pang, Arup K Chakraborty, James O Lloyd-Smith, Ren Sun

    Published 2020-10-01
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