Aviv Regev

Regev at the [[Intelligent Systems for Molecular Biology]] conference in 2017 Aviv Regev (born 11 July 1971) is a computational biologist and systems biologist and Executive Vice President and Head of Genentech Research and Early Development in Genentech/Roche. She is a core member (on leave) at the Broad Institute of MIT and Harvard and professor (on leave) at the Department of Biology of the Massachusetts Institute of Technology. Regev is a pioneer of single cell genomics and of computational and systems biology of gene regulatory circuits. She founded and leads the Human Cell Atlas project, together with Sarah Teichmann. Provided by Wikipedia
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  1. 1
    Deep generative model embedding of single-cell RNA-Seq profiles on hyperspheres and hyperbolic spaces

    Deep generative model embedding of single-cell RNA-Seq profiles on hyperspheres and hyperbolic spaces by Jiarui Ding, Aviv Regev

    Published 2021-05-01
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  2. 2
    Many lncRNAs, 5’UTRs, and pseudogenes are translated and some are likely to express functional proteins

    Many lncRNAs, 5’UTRs, and pseudogenes are translated and some are likely to express functional proteins by Zhe Ji, Ruisheng Song, Aviv Regev, Kevin Struhl

    Published 2015-12-01
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  3. 3
    A cell-free nanobody engineering platform rapidly generates SARS-CoV-2 neutralizing nanobodies

    A cell-free nanobody engineering platform rapidly generates SARS-CoV-2 neutralizing nanobodies by Xun Chen, Matteo Gentili, Nir Hacohen, Aviv Regev

    Published 2021-09-01
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  4. 4
    Reply to “Do genome‐scale models need exact solvers or clearer standards?”

    Reply to “Do genome‐scale models need exact solvers or clearer standards?” by Leonid Chindelevitch, Jason Trigg, Aviv Regev, Bonnie Berger

    Published 2015-10-01
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  5. 5
    Changes in Nucleosome Occupancy Associated with Metabolic Alterations in Aged Mammalian Liver

    Changes in Nucleosome Occupancy Associated with Metabolic Alterations in Aged Mammalian Liver by Irina M. Bochkis, Dariusz Przybylski, Jenny Chen, Aviv Regev

    Published 2014-11-01
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  6. 6
    Integrated regulatory models for inference of subtype‐specific susceptibilities in glioblastoma

    Integrated regulatory models for inference of subtype‐specific susceptibilities in glioblastoma by Yunpeng Liu, Ning Shi, Aviv Regev, Shan He, Michael T Hemann

    Published 2020-09-01
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  7. 7
    MAUDE: inferring expression changes in sorting-based CRISPR screens

    MAUDE: inferring expression changes in sorting-based CRISPR screens by Carl G. de Boer, John P. Ray, Nir Hacohen, Aviv Regev

    Published 2020-06-01
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  8. 8
    Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

    Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods by Brian J. Haas, Alexander Dobin, Bo Li, Nicolas Stransky, Nathalie Pochet, Aviv Regev

    Published 2019-10-01
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  9. 9
    The role of nucleosome positioning in the evolution of gene regulation.

    The role of nucleosome positioning in the evolution of gene regulation. by Alexander M Tsankov, Dawn Anne Thompson, Amanda Socha, Aviv Regev, Oliver J Rando

    Published 2010-07-01
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  10. 10
    Enforcement of developmental lineage specificity by transcription factor Oct1

    Enforcement of developmental lineage specificity by transcription factor Oct1 by Zuolian Shen, Jinsuk Kang, Arvind Shakya, Marcin Tabaka, Elke A Jarboe, Aviv Regev, Dean Tantin

    Published 2017-05-01
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  11. 11
    Cell-type-specific mRNA transcription and degradation kinetics in zebrafish embryogenesis from metabolically labeled single-cell RNA-seq

    Cell-type-specific mRNA transcription and degradation kinetics in zebrafish embryogenesis from metabolically labeled single-cell RNA-seq by Lior Fishman, Avani Modak, Gal Nechooshtan, Talya Razin, Florian Erhard, Aviv Regev, Jeffrey A. Farrell, Michal Rabani

    Published 2024-04-01
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  12. 12
    Combinatorial prediction of marker panels from single‐cell transcriptomic data

    Combinatorial prediction of marker panels from single‐cell transcriptomic data by Conor Delaney, Alexandra Schnell, Louis V Cammarata, Aaron Yao‐Smith, Aviv Regev, Vijay K Kuchroo, Meromit Singer

    Published 2019-10-01
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  13. 13
    A Switch in p53 Dynamics Marks Cells That Escape from DSB-Induced Cell Cycle Arrest

    A Switch in p53 Dynamics Marks Cells That Escape from DSB-Induced Cell Cycle Arrest by Michael Tsabar, Caroline S. Mock, Veena Venkatachalam, Jose Reyes, Kyle W. Karhohs, Trudy G. Oliver, Aviv Regev, Ashwini Jambhekar, Galit Lahav

    Published 2020-08-01
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  14. 14
    Integrated multi-omics analyses reveal homology-directed repair pathway as a unique dependency in near-haploid leukemia

    Integrated multi-omics analyses reveal homology-directed repair pathway as a unique dependency in near-haploid leukemia by Yunpeng Liu-Lupo, James Dongjoo Ham, Swarna K. A. Jeewajee, Lan Nguyen, Toni Delorey, Azucena Ramos, David M. Weinstock, Aviv Regev, Michael T. Hemann

    Published 2023-06-01
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  15. 15
    RBPJ Controls Development of Pathogenic Th17 Cells by Regulating IL-23 Receptor Expression

    RBPJ Controls Development of Pathogenic Th17 Cells by Regulating IL-23 Receptor Expression by Gerd Meyer zu Horste, Chuan Wu, Chao Wang, Le Cong, Mathias Pawlak, Youjin Lee, Wassim Elyaman, Sheng Xiao, Aviv Regev, Vijay K. Kuchroo

    Published 2016-07-01
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  16. 16
    Emergence of division of labor in tissues through cell interactions and spatial cues

    Emergence of division of labor in tissues through cell interactions and spatial cues by Miri Adler, Noa Moriel, Aleksandrina Goeva, Inbal Avraham-Davidi, Simon Mages, Taylor S. Adams, Naftali Kaminski, Evan Z. Macosko, Aviv Regev, Ruslan Medzhitov, Mor Nitzan

    Published 2023-05-01
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  17. 17
    Temporal Tracking of Microglia Activation in Neurodegeneration at Single-Cell Resolution

    Temporal Tracking of Microglia Activation in Neurodegeneration at Single-Cell Resolution by Hansruedi Mathys, Chinnakkaruppan Adaikkan, Fan Gao, Jennie Z. Young, Elodie Manet, Martin Hemberg, Philip L. De Jager, Richard M. Ransohoff, Aviv Regev, Li-Huei Tsai

    Published 2017-10-01
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  18. 18
    Heterogeneous Responses of Hematopoietic Stem Cells to Inflammatory Stimuli Are Altered with Age

    Heterogeneous Responses of Hematopoietic Stem Cells to Inflammatory Stimuli Are Altered with Age by Mati Mann, Arnav Mehta, Carl G. de Boer, Monika S. Kowalczyk, Kevin Lee, Pearce Haldeman, Noga Rogel, Abigail R. Knecht, Daneyal Farouq, Aviv Regev, David Baltimore

    Published 2018-12-01
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  19. 19
    Geometry-dependent functional changes in iPSC-derived cardiomyocytes probed by functional imaging and RNA sequencing.

    Geometry-dependent functional changes in iPSC-derived cardiomyocytes probed by functional imaging and RNA sequencing. by Christopher A Werley, Miao-Ping Chien, Jellert Gaublomme, Karthik Shekhar, Vincent Butty, B Alexander Yi, Joel M Kralj, William Bloxham, Laurie A Boyer, Aviv Regev, Adam E Cohen

    Published 2017-01-01
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  20. 20
    Transcriptional profiling of Plasmodium falciparum parasites from patients with severe malaria identifies distinct low vs. high parasitemic clusters.

    Transcriptional profiling of Plasmodium falciparum parasites from patients with severe malaria identifies distinct low vs. high parasitemic clusters. by Danny A Milner, Nathalie Pochet, Malkie Krupka, Chris Williams, Karl Seydel, Terrie E Taylor, Yves Van de Peer, Aviv Regev, Dyann Wirth, Johanna P Daily, Jill P Mesirov

    Published 2012-01-01
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