Fast and sensitive alignment of microbial whole genome sequencing reads to large sequence datasets on a desktop PC: application to metagenomic datasets and pathogen identification. by Lőrinc S Pongor, Roberto Vera, Balázs Ligeti

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Differential signal sensitivities can contribute to the stability of multispecies bacterial communities by János Juhász, Dóra Bihary, Attila Jády, Sándor Pongor, Balázs Ligeti

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A Network-Based Target Overlap Score for Characterizing Drug Combinations: High Correlation with Cancer Clinical Trial Results. by Balázs Ligeti, Zsófia Pénzváltó, Roberto Vera, Balázs Győrffy, Sándor Pongor

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ProkBERT family: genomic language models for microbiome applications by Balázs Ligeti, István Szepesi-Nagy, Babett Bodnár, Noémi Ligeti-Nagy, János Juhász, János Juhász

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DECREASED LACTOBACILLACEAE ABUNDANCE IN THE GUT MICROBIOTA OF A ‘THREE-HIT’ SCHIZOPHRENIA RAT MODEL (WISKET) by Szonja Plesz, Leatitia Adlan, Alexandra Büki, Gyöngyi Horvath, Balázs Ligeti, Zoltán Zádori, Gabriella Kékesi

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GUT MICROBIAL ABUNDANCE IN THE SCHIZOPHRENIA-LIKE WISKET RAT MODEL by Leatitia Adlan, Szonja Plesz, Alexandra Büki, Gyöngyi Horvath, Balázs Ligeti, Zoltán Zádori, Gabriella Kékesi

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Occurrence of Ordered and Disordered Structural Elements in Postsynaptic Proteins Supports Optimization for Interaction Diversity by Annamária Kiss-Tóth, Laszlo Dobson, Bálint Péterfia, Annamária F. Ángyán, Balázs Ligeti, Gergely Lukács, Zoltán Gáspári

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Gut Microbiome in Patients with Obstructive Sleep Apnoea by Andras Bikov, Helga Szabo, Marton Piroska, Laszlo Kunos, Marcell Szily, Balazs Ligeti, Nora Makra, Dora Szabo, David Laszlo Tarnoki, Adam Domonkos Tarnoki

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Colonization Dynamics of Multidrug-Resistant <i>Klebsiella pneumoniae</i> Are Dictated by Microbiota-Cluster Group Behavior over Individual Antibiotic Susceptibility: A Metataxonom... by János Juhász, Balázs Ligeti, Márió Gajdács, Nóra Makra, Eszter Ostorházi, Ferenc Balázs Farkas, Balázs Stercz, Ákos Tóth, Judit Domokos, Sándor Pongor, Dóra Szabó

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Association between Gut Microbial Diversity and Carotid Intima-Media Thickness by Helga Szabo, Anita Hernyes, Marton Piroska, Balazs Ligeti, Peter Fussy, Luca Zoldi, Szonja Galyasz, Nora Makra, Dora Szabo, Adam Domonkos Tarnoki, David Laszlo Tarnoki

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COVID-19 Infection Alters the Microbiome: Elite Athletes and Sedentary Patients Have Similar Bacterial Flora by Gergely Babszky, Ferenc Torma, Dora Aczel, Peter Bakonyi, Zoltan Gombos, Janos Feher, Dóra Szabó, Balázs Ligeti, Sándor Pongor, Laszlo Balogh, Anikó Pósa, Zsolt Radak

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Non-small cell lung cancer patients treated with Anti-PD1 immunotherapy show distinct microbial signatures and metabolic pathways according to progression-free survival and PD-L1 s... by David Dora, Balazs Ligeti, Tamas Kovacs, Peter Revisnyei, Gabriella Galffy, Edit Dulka, Dániel Krizsán, Regina Kalcsevszki, Zsolt Megyesfalvi, Balazs Dome, Glen J. Weiss, Zoltan Lohinai

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The Relationship between Atherosclerosis and Gut Microbiome in Patients with Obstructive Sleep Apnoea by Helga Szabo, Marton Piroska, Anita Hernyes, Luca Zoldi, Janos Juhasz, Balazs Ligeti, Nora Makra, Dora Szabo, Andras Bikov, Laszlo Kunos, Adam Domonkos Tarnoki, David Laszlo Tarnoki

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The Nonsteroidal Anti-Inflammatory Drug Ketorolac Alters the Small Intestinal Microbiota and Bile Acids Without Inducing Intestinal Damage or Delaying Peristalsis in the Rat by Barbara Hutka, Bernadette Lázár, András S. Tóth, Bence Ágg, Bence Ágg, Szilvia B. László, Nóra Makra, Balázs Ligeti, Bálint Scheich, Kornél Király, Mahmoud Al-Khrasani, Dóra Szabó, Péter Ferdinandy, Péter Ferdinandy, Klára Gyires, Zoltán S. Zádori

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