Protocol to profile the bioenergetics of organoids using Seahorse by Marlies C. Ludikhuize, Maaike Meerlo, Boudewijn M.T. Burgering, Maria J. Rodríguez Colman

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FOXO3 Selectively Amplifies Enhancer Activity to Establish Target Gene Regulation by Astrid Eijkelenboom, Michal Mokry, Lydia M. Smits, Edward E. Nieuwenhuis, Boudewijn M.T. Burgering

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Quantitative liver proteomics identifies FGF19 targets that couple metabolism and proliferation. by Vittoria Massafra, Alexandra Milona, Harmjan R Vos, Boudewijn M T Burgering, Saskia W C van Mil

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p53 Forms Redox-Dependent Protein–Protein Interactions through Cysteine 277 by Tao Shi, Paulien E. Polderman, Marc Pagès-Gallego, Robert M. van Es, Harmjan R. Vos, Boudewijn M. T. Burgering, Tobias B. Dansen

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Mdm2 induces mono-ubiquitination of FOXO4. by Arjan B Brenkman, Peter L J de Keizer, Niels J F van den Broek, A G Jochemsen, Boudewijn M Th Burgering

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Multiple regulatory intrinsically disordered motifs control FOXO4 transcription factor binding and function by Benjamin Bourgeois, Tianshu Gui, Diana Hoogeboom, Henry G. Hocking, Gesa Richter, Emil Spreitzer, Martin Viertler, Klaus Richter, Tobias Madl, Boudewijn M.T. Burgering

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The Human 2-Cys Peroxiredoxins form Widespread, Cysteine-Dependent- and Isoform-Specific Protein-Protein Interactions by Loes van Dam, Marc Pagès-Gallego, Paulien E. Polderman, Robert M. van Es, Boudewijn M. T. Burgering, Harmjan R. Vos, Tobias B. Dansen

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Regulation of sterol carrier protein gene expression by the Forkhead transcription factor FOXO3a by Tobias B. Dansen, Geert J.P.L. Kops, Simone Denis, Nannette Jelluma, Ronald J.A. Wanders, Johannes L. Bos, Boudewijn M.T. Burgering, Karel W.A. Wirtz

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Genome‐wide analysis of FOXO3 mediated transcription regulation through RNA polymerase II profiling by Astrid Eijkelenboom, Michal Mokry, Elzo de Wit, Lydia M Smits, Paulien E Polderman, Miranda H van Triest, Ruben van Boxtel, Almut Schulze, Wouter de Laat, Edwin Cuppen, Boudewijn M T Burgering

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A Single Complex Agpat2 Allele in a Patient With Partial Lipodystrophy by Marjoleine F. Broekema, Maarten P. G. Massink, Joep De Ligt, Edwin C. A. Stigter, Houshang Monajemi, Houshang Monajemi, Jeroen De Ridder, Boudewijn M. T. Burgering, Gijs W. van Haaften, Eric Kalkhoven

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Rewiring glucose metabolism improves 5-FU efficacy in p53-deficient/KRAS G12D glycolytic colorectal tumors by Marlies C. Ludikhuize, Sira Gevers, Nguyen T. B. Nguyen, Maaike Meerlo, S. Khadijeh Shafiei Roudbari, M. Can Gulersonmez, Edwin C. A. Stigter, Jarno Drost, Hans Clevers, Boudewijn M. T. Burgering, Maria J. Rodríguez Colman

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The Lipid Raft Component Stomatin Interacts with the Na⁺ Taurocholate Cotransporting Polypeptide (NTCP) and Modulates Bile Salt Uptake by Monique D. Appelman, Marion J.D. Robin, Esther W.M. Vogels, Christie Wolzak, Winnie G. Vos, Harmjan R. Vos, Robert M. Van Es, Boudewijn M.T. Burgering, Stan F.J. Van de Graaf

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ALS-associated C21ORF2 variant disrupts DNA damage repair, mitochondrial metabolism, neuronal excitability and NEK1 levels in human motor neurons by Pavol Zelina, Anna Aster de Ruiter, Christy Kolsteeg, Ilona van Ginneken, Harmjan R. Vos, Laura F. Supiot, Boudewijn M. T. Burgering, Frank J. Meye, Jan H. Veldink, Leonard H. van den Berg, R. Jeroen Pasterkamp

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Proteome-wide Changes in Protein Turnover Rates in C. elegans Models of Longevity and Age-Related Disease by Marieke Visscher, Sasha De Henau, Mattheus H.E. Wildschut, Robert M. van Es, Ineke Dhondt, Helen Michels, Patrick Kemmeren, Ellen A. Nollen, Bart P. Braeckman, Boudewijn M.T. Burgering, Harmjan R. Vos, Tobias B. Dansen

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Mitochondrial H2O2 release does not directly cause damage to chromosomal DNA by Daan M. K. van Soest, Paulien E. Polderman, Wytze T. F. den Toom, Janneke P. Keijer, Markus J. van Roosmalen, Tim M. F. Leyten, Johannes Lehmann, Susan Zwakenberg, Sasha De Henau, Ruben van Boxtel, Boudewijn M. T. Burgering, Tobias B. Dansen

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Specific Labeling of Stem Cell Activity in Human Colorectal Organoids Using an ASCL2-Responsive Minigene by Koen C. Oost, Lisa van Voorthuijsen, Arianna Fumagalli, Rik G.H. Lindeboom, Joep Sprangers, Manja Omerzu, Maria J. Rodriguez-Colman, Maria C. Heinz, Ingrid Verlaan-Klink, Madelon M. Maurice, Boudewijn M.T. Burgering, Jacco van Rheenen, Michiel Vermeulen, Hugo J.G. Snippert

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Steroidogenic control of liver metabolism through a nuclear receptor-network by Alexandra Milona, Vittoria Massafra, Harmjan Vos, Jyoti Naik, Natalia Artigas, Helen A.B. Paterson, Ingrid T.G.W. Bijsmans, Ellen C.L. Willemsen, Jose M. Ramos Pittol, Irene Miguel-Aliaga, Piter Bosma, Boudewijn M.T. Burgering, Catherine Williamson, Santiago Vernia, Waljit S. Dhillo, Saskia W.C. van Mil, Bryn M. Owen

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FER regulates endosomal recycling and is a predictor for adjuvant taxane benefit in breast cancer by Sandra Tavares, Nalan Liv, Milena Pasolli, Mark Opdam, Max A.K. Rätze, Manuel Saornil, Lilian M. Sluimer, Rutger C.C. Hengeveld, Robert van Es, Erik van Werkhoven, Harmjan Vos, Holger Rehmann, Boudewijn M.T. Burgering, Hendrika M. Oosterkamp, Susanne M.A. Lens, Judith Klumperman, Sabine C. Linn, Patrick W.B. Derksen

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Pyruvate metabolism controls chromatin remodeling during CD4+ T cell activation by Enric Mocholi, Laura Russo, Keshav Gopal, Andrew G. Ramstead, Sophia M. Hochrein, Harmjan R. Vos, Geert Geeven, Adeolu O. Adegoke, Anna Hoekstra, Robert M. van Es, Jose Ramos Pittol, Sebastian Vastert, Jared Rutter, Timothy Radstake, Jorg van Loosdregt, Celia Berkers, Michal Mokry, Colin C. Anderson, Ryan M. O’Connell, Martin Vaeth, John Ussher, Boudewijn M.T. Burgering, Paul J. Coffer

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MicroRNA-130a Contributes to Type-2 Classical DC-activation in Sjögren's Syndrome by Targeting Mitogen- and Stress-Activated Protein Kinase-1 by Ana P. Lopes, Ana P. Lopes, Joel A. G. van Roon, Joel A. G. van Roon, Sofie L. M. Blokland, Sofie L. M. Blokland, Maojie Wang, Eleni Chouri, Eleni Chouri, Sarita A. Y. Hartgring, Sarita A. Y. Hartgring, Kim M. G. van der Wurff-Jacobs, Aike A. Kruize, Boudewijn M. T. Burgering, Marzia Rossato, Marzia Rossato, Marzia Rossato, Timothy R. D. J. Radstake, Timothy R. D. J. Radstake, Maarten R. Hillen, Maarten R. Hillen

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