SVExpress: identifying gene features altered recurrently in expression with nearby structural variant breakpoints by Yiqun Zhang, Fengju Chen, Chad J. Creighton

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Pan-cancer molecular subtypes revealed by mass-spectrometry-based proteomic characterization of more than 500 human cancers by Fengju Chen, Darshan S. Chandrashekar, Sooryanarayana Varambally, Chad J. Creighton

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Global impact of somatic structural variation on the cancer proteome by Fengju Chen, Yiqun Zhang, Darshan S. Chandrashekar, Sooryanarayana Varambally, Chad J. Creighton

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Author Correction: Proteogenomic characterization of 2002 human cancers reveals pan-cancer molecular subtypes and associated pathways by Yiqun Zhang, Fengju Chen, Darshan S. Chandrashekar, Sooryanarayana Varambally, Chad J. Creighton

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Proteogenomic characterization of 2002 human cancers reveals pan-cancer molecular subtypes and associated pathways by Yiqun Zhang, Fengju Chen, Darshan S. Chandrashekar, Sooryanarayana Varambally, Chad J. Creighton

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Reprogramming of the estrogen responsive transcriptome contributes to tamoxifen-dependent protection against tumorigenesis in the p53 null mammary epithelial cells. by Murugesan Palaniappan, David Edwards, Chad J Creighton, Daniel Medina, Orla M Conneely

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Transcriptional profiling of non-small cell lung cancer cells with activating EGFR somatic mutations. by Kuicheon Choi, Chad J Creighton, David Stivers, Nobukazu Fujimoto, Jonathan M Kurie

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Genomic Profiling of Prostate Cancers from African American Men by Patricia Castro, Chad J. Creighton, Mustafa Ozen, Dror Berel, Martha P. Mims, Michael Ittmann

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Meta-analysis of host transcriptional responses to SARS-CoV-2 infection reveals their manifestation in human tumors by Fengju Chen, Yiqun Zhang, Richard Sucgang, Sasirekha Ramani, David Corry, Farrah Kheradmand, Chad J. Creighton

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The Mef2 Transcription Network Is Disrupted in Myotonic Dystrophy Heart Tissue, Dramatically Altering miRNA and mRNA Expression by Auinash Kalsotra, Ravi K. Singh, Priyatansh Gurha, Amanda J. Ward, Chad J. Creighton, Thomas A. Cooper

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Stem cell antigen-1 (sca-1) regulates mammary tumor development and cell migration. by Torey D Batts, Heather L Machado, Yiqun Zhang, Chad J Creighton, Yi Li, Jeffrey M Rosen

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Renal Carcinoma Is Associated With Increased Risk of Coronavirus Infections by Satyendra C. Tripathi, Satyendra C. Tripathi, Vishwajit Deshmukh, Vishwajit Deshmukh, Chad J. Creighton, Ashlesh Patil, Ashlesh Patil

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Mapping Astrocyte Transcriptional Signatures in Response to Neuroactive Compounds by Debosmita Sardar, Brittney Lozzi, Junsung Woo, Teng-Wei Huang, Caroline Cvetkovic, Chad J. Creighton, Robert Krencik, Benjamin Deneen

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Functional Heterogeneity of Mouse Prostate Stromal Cells Revealed by Single-Cell RNA-Seq by Oh-Joon Kwon, Yiqun Zhang, Yumei Li, Xing Wei, Li Zhang, Rui Chen, Chad J. Creighton, Li Xin

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miR-1 and miR-133b are differentially expressed in patients with recurrent prostate cancer. by Omer Faruk Karatas, Esra Guzel, Ilknur Suer, Isin D Ekici, Turhan Caskurlu, Chad J Creighton, Michael Ittmann, Mustafa Ozen

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Transcriptional control of a collagen deposition and adhesion process that promotes lung adenocarcinoma growth and metastasis by Xiaochao Tan, Priyam Banerjee, Xin Liu, Jiang Yu, Sieun Lee, Young-Ho Ahn, Chad J. Creighton, Jonathan M. Kurie

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Comparative and integrative analysis of transcriptomic and epigenomic-wide DNA methylation changes in African American prostate cancer by Chad J. Creighton, Flora Zhang, Yiqun Zhang, Patricia Castro, Rong Hu, Md Islam, Somiranjan Ghosh, Michael Ittmann, Bernard Kwabi-Addo

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UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses by Darshan S. Chandrashekar, Bhuwan Bashel, Sai Akshaya Hodigere Balasubramanya, Chad J. Creighton, Israel Ponce-Rodriguez, Balabhadrapatruni V.S.K. Chakravarthi, Sooryanarayana Varambally

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Pregnancy-induced noncoding RNA (PINC) associates with polycomb repressive complex 2 and regulates mammary epithelial differentiation. by Amy N Shore, Elena B Kabotyanski, Kevin Roarty, Martin A Smith, Yiqun Zhang, Chad J Creighton, Marcel E Dinger, Jeffrey M Rosen

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TMEM106B drives lung cancer metastasis by inducing TFEB-dependent lysosome synthesis and secretion of cathepsins by Samrat T. Kundu, Caitlin L. Grzeskowiak, Jared J. Fradette, Laura A. Gibson, Leticia B. Rodriguez, Chad J. Creighton, Kenneth L. Scott, Don L. Gibbons

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