Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli by Gat-Viks, Irit, Chevrier, Nicolas, Wilentzik, Roni, Eisenhaure, Thomas, Raychowdhury, Raktima, Steuerman, Yael, Shalek, Alex K., Hacohen, Nir, Amit, Ido, Regev, Aviv

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An Integrative Framework Reveals Signaling-to-Transcription Events in Toll-like Receptor Signaling by Yosef, Nir, Qiao, Jana, Raychowdhury, Raktima, Maritzen, Tanja, Haucke, Volker, Satoh, Takashi, Akira, Shizuo, Mertins, Philipp, Przybylski, Dariusz, Eisenhaure, Thomas, Carr, Steven A, Regev, Aviv, Hacohen, Nir, Chevrier, Nicolas, Clauser, Karl R.

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Nanowire-Mediated Delivery Enables Functional Interrogation of Primary Immune Cells: Application to the Analysis of Chronic Lymphocytic Leukemia by Shalek, Alex K., Gaublomme, Jellert T., Wang, Lili, Yosef, Nir, Chevrier, Nicolas, Andersen, Mette S., Robinson, Jacob T., Pochet, Nathalie, Neuberg, Donna S., Gertner, Rona S., Amit, Ido, Brown, Jennifer R., Hacohen, Nir, Regev, Aviv, Wu, Catherine J., Park, Hongkun

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Parsing the Interferon Transcriptional Network and Its Disease Associations by Mostafavi, Sara, Yoshida, Hideyuki, Moodley, Devapregasan, LeBoité, Hugo, Rothamel, Katherine, Raj, Towfique, Ye, Chun Jimmie, Chevrier, Nicolas, Zhang, Shen-Ying, Feng, Ting, Lee, Mark, Casanova, Jean-Laurent, Clark, James D., Hegen, Martin, Telliez, Jean-Baptiste, Hacohen, Nir, De Jager, Philip L., Regev, Aviv, Mathis, Diane, Benoist, Christophe

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Unbiased reconstruction of a mammalian transcriptional network mediating the differential response to pathogens by Amit, Ido, Guttman, Mitchell, Leite, Ana Paula, Regev, Aviv, Garber, Manuel, Chevrier, Nicolas, Donner, Yoni, Eisenhaure, Thomas, Grenier, Jennifer K., Li, Weibo, Zuk, Or, Schubert, Lisa A., Birditt, Brian, Shay, Tal, Goren, Alon, Zhang, Xiaolan, Smith, Zachary, Deering, Raquel, McDonald, Rebecca C., Cabili, Moran N., Bernstein, Bradley E., Rinn, John L., Meissner, Alexander, Root, David E., Hacohen, Nir

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Systematic Discovery of TLR Signaling Components Delineates Viral-Sensing Circuits by Chevrier, Nicolas, Mertins, Philipp, Artyomov, Maxim N., Shalek, Alex K., Iannacone, Matteo, Ciaccio, Mark F., Gat-Viks, Irit, Tonti, Elena, DeGrace, Marciela M., Clauser, Karl R., Garber, Manuel, Eisenhaure, Thomas, Yosef, Nir, Robinson, Jacob, Sutton, Amy, Andersen, Mette S., Root, David E., von Andrian, Ulrich, Jones, Richard Bradley, Park, Hongkun, Carr, Steven A., Regev, Aviv, Amit, Ido, Hacohen, Nir

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A High-Throughput Chromatin Immunoprecipitation Approach Reveals Principles of Dynamic Gene Regulation in Mammals by Garber, Manuel, Yosef, Nir, Goren, Alon, Raychowdhury, Raktima, Thielke, Anne, Guttman, Mitchell, Robinson, James, Minie, Brian, Chevrier, Nicolas, Itzhaki, Zohar, Blecher-Gonen, Ronnie, Bornstein, Chamutal, Amann-Zalcenstein, Daniela, Weiner, Assaf, Friedrich, Dennis C., Meldrim, James C., Ram, Oren, Cheng, Christine S., Gnirke, Andreas, Fisher, Sheila, Friedman, Nir, Wong, Bang, Bernstein, Bradley E., Nusbaum, Chad, Hacohen, Nir, Regev, Aviv, Amit, Ido

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