Tissue-specific pathway activities: A retrospective analysis in COVID-19 patients by Nhung Pham, Nhung Pham, Finterly Hu, Finterly Hu, Chris T. Evelo, Chris T. Evelo, Martina Kutmon, Martina Kutmon

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A Review of Pathway-Based Analysis Tools That Visualize Genetic Variants by Elisa Cirillo, Laurence D. Parnell, Chris T. Evelo

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Beyond Pathway Analysis: Identification of Active Subnetworks in Rett Syndrome by Ryan A. Miller, Friederike Ehrhart, Friederike Ehrhart, Lars M. T. Eijssen, Lars M. T. Eijssen, Denise N. Slenter, Leopold M. G. Curfs, Chris T. Evelo, Chris T. Evelo, Chris T. Evelo, Egon L. Willighagen, Martina Kutmon, Martina Kutmon

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Identification of Biological Pathways Contributing to Marbling in Skeletal Muscle to Improve Beef Cattle Breeding by Zahra Roudbari, Zahra Roudbari, Susan L. Coort, Martina Kutmon, Martina Kutmon, Lars Eijssen, Jonathan Melius, Tomasz Sadkowski, Chris T. Evelo, Chris T. Evelo

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WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization [v1; ref status: indexed, http://f1000r.es/3ij] by Martina Kutmon, Samad Lotia, Chris T Evelo, Alexander R Pico

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Investigating the Molecular Processes behind the Cell-Specific Toxicity Response to Titanium Dioxide Nanobelts by Laurent A. Winckers, Chris T. Evelo, Egon L. Willighagen, Martina Kutmon

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Overlap of vitamin A and vitamin D target genes with CAKUT-related processes [version 2; peer review: 2 approved, 2 approved with reservations] by Chris T. Evelo, Alberto Mantovani, Anaı̈s Baudot, Friederike Ehrhart, Ozan Ozisik

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A Community-Driven, Openly Accessible Molecular Pathway Integrating Knowledge on Malignant Pleural Mesothelioma by Marvin Martens, Franziska Kreidl, Friederike Ehrhart, Friederike Ehrhart, Didier Jean, Merlin Mei, Merlin Mei, Holly M. Mortensen, Alistair Nash, Penny Nymark, Chris T. Evelo, Chris T. Evelo, Ferdinando Cerciello

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Molecular pathways involved in prostate carcinogenesis: insights from public microarray datasets. by Sarah C Baetke, Michiel E Adriaens, Renaud Seigneuric, Chris T Evelo, Lars M T Eijssen

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Exploring pathway interactions to detect molecular mechanisms of disease: 22q11.2 deletion syndrome by Woosub Shin, Martina Kutmon, Eleni Mina, Therese van Amelsvoort, Chris T Evelo, Friederike Ehrhart

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Biological Pathways Leading From ANGPTL8 to Diabetes Mellitus–A Co-expression Network Based Analysis by Amnah Siddiqa, Amnah Siddiqa, Elisa Cirillo, Samar H. K. Tareen, Amjad Ali, Martina Kutmon, Martina Kutmon, Lars M. T. Eijssen, Jamil Ahmad, Jamil Ahmad, Chris T. Evelo, Chris T. Evelo, Susan L. Coort

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Introducing WikiPathways as a Data-Source to Support Adverse Outcome Pathways for Regulatory Risk Assessment of Chemicals and Nanomaterials by Marvin Martens, Tim Verbruggen, Penny Nymark, Penny Nymark, Roland Grafström, Roland Grafström, Lyle D. Burgoon, Hristo Aladjov, Fernando Torres Andón, Fernando Torres Andón, Chris T. Evelo, Chris T. Evelo, Egon L. Willighagen

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Understanding signaling and metabolic paths using semantified and harmonized information about biological interactions by Ryan A. Miller, Martina Kutmon, Anwesha Bohler, Andra Waagmeester, Chris T. Evelo, Egon L. Willighagen

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Understanding signaling and metabolic paths using semantified and harmonized information about biological interactions. by Ryan A Miller, Martina Kutmon, Anwesha Bohler, Andra Waagmeester, Chris T Evelo, Egon L Willighagen

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A resource to explore the discovery of rare diseases and their causative genes by Friederike Ehrhart, Egon L. Willighagen, Martina Kutmon, Max van Hoften, Leopold M. G. Curfs, Chris T. Evelo

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Rett syndrome – biological pathways leading from MECP2 to disorder phenotypes by Friederike Ehrhart, Susan L. M. Coort, Elisa Cirillo, Eric Smeets, Chris T. Evelo, Leopold M. G. Curfs

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Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources. by Andra Waagmeester, Martina Kutmon, Anders Riutta, Ryan Miller, Egon L Willighagen, Chris T Evelo, Alexander R Pico

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PathVisio 3: an extendable pathway analysis toolbox. by Martina Kutmon, Martijn P van Iersel, Anwesha Bohler, Thomas Kelder, Nuno Nunes, Alexander R Pico, Chris T Evelo

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Extending inherited metabolic disorder diagnostics with biomarker interaction visualizations by Denise N. Slenter, Irene M. G. M. Hemel, Chris T. Evelo, Jörgen Bierau, Egon L. Willighagen, Laura K. M. Steinbusch

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Explicit interaction information from WikiPathways in RDF facilitates drug discovery in the Open PHACTS Discovery Platform [version 2; referees: 2 approved] by Ryan A. Miller, Peter Woollard, Egon L. Willighagen, Daniela Digles, Martina Kutmon, Antonis Loizou, Andra Waagmeester, Stefan Senger, Chris T. Evelo

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