Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complex by Chiner-Oms, A, Sanchez-Buso, L, Corander, J, Gagneux, S, Harris, SR, Young, D, González-Candelas, F, Comas, I

Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans. by Comas, I, Comas, I, Coscolla, M, Luo, T, Borrell, S, Holt, K, Kato-Maeda, M, Parkhill, J, Parkhill, J, Malla, B, Berg, S, Thwaites, G, Yeboah-Manu, D, Bothamley, G, Mei, J, Wei, L, Bentley, S, Harris, SR, Niemann, S, Diel, R, Aseffa, A, Gao, Q, Young, D, Gagneux, S

Catalogue of mutations in Mycobacterium tuberculosis complex and their association with drug resistance by Rodwell, T, Miotto, P, Köser, C, Walker, T, Fowler, PW, Knaggs, J, Iqbal, Z, Hunt, M, Chindelevitch, L, Farhat, M, Cirillo, D, Crook, D, Comas, I, Posey, J, Vally Omar, S, Peto, T, Walker, A, Suresh, A, Uplekar, S, Laurent, S, Colman, R

The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis by Walker, T, Miotto, P, Köser, CU, Fowler, PW, Knaggs, J, Iqbal, Z, Hunt, M, Chindelevitch, L, Farhat, M, Cirillo, D, Comas, I, Posey, J, Omar, SV, Peto, T, Suresh, A, Uplekar, S, Laurent, S, Brankin, A, Carter, J, Clifton, D, Earle, S, Hoosdally, S, Lachapelle, A, Rodger, G, Roohi, A, Thuong, N, Thwaites, G, Wilson, D, Crook, D, Ismail, N, Rodwell, T

Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase by Ezewudo, M, Borens, A, Chiner-Oms, Á, Miotto, P, Chindelevitch, L, Starks, A, Hanna, D, Liwski, R, Zignol, M, Gilpin, C, Niemann, S, Kohl, T, Warren, R, Crook, D, Gagneux, S, Hoffner, S, Rodrigues, C, Comas, I, Engelthaler, D, Alland, D, Rigouts, L, Lange, C, Dheda, K, Hasan, R, McNerney, R, Cirillo, D, Schito, M, Rodwell, T, Posey, J

Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe by Hunt, M, Bradley, P, Lapierre, SG, Heys, S, Thomsit, M, Hall, MB, Malone, KM, Wintringer, P, Walker, TM, Cirillo, DM, Comas, I, Farhat, MR, Fowler, P, Gardy, J, Ismail, N, Kohl, TA, Mathys, V, Merker, M, Niemann, S, Omar, SV, Sintchenko, V, Smith, G, van Soolingen, D, Supply, P, Tahseen, S, Wilcox, M, Arandjelovic, I, Peto, TEA, Crook, DW, Iqbal, Z

A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis. by Miotto, P, Tessema, B, Tagliani, E, Chindelevitch, L, Starks, A, Emerson, C, Hanna, D, Kim, P, Liwski, R, Zignol, M, Gilpin, C, Niemann, S, Denkinger, C, Fleming, J, Warren, R, Crook, D, Posey, J, Gagneux, S, Hoffner, S, Rodrigues, C, Comas, I, Engelthaler, D, Murray, M, Alland, D, Rigouts, L, Lange, C, Dheda, K, Hasan, R, Ranganathan, U, McNerney, R, Ezewudo, M, Cirillo, D, Schito, M, Köser, C, Rodwell, T