Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms by You Frank M, Deal Karin R, Wang Jirui, Britton Monica T, Fass Joseph N, Lin Dawei, Dandekar Abhaya M, Leslie Charles A, Aradhya Mallikarjuna, Luo Ming-Cheng, Dvorak Jan

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