Transposon signatures of allopolyploid genome evolution by Adam M. Session, Daniel S. Rokhsar

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Old can be new again: HAPPY whole genome sequencing, mapping and assembly by Zhihua Jiang, Daniel S. Rokhsar, Richard M. Harland

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Erratum by Zhihua Jiang, Daniel S. Rokhsar, Richard M. Harland

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CRISPR-Cas9-mediated knockout of CYP79D1 and CYP79D2 in cassava attenuates toxic cyanogen production by Michael A. Gomez, Kodiak C. Berkoff, Kodiak C. Berkoff, Baljeet K. Gill, Anthony T. Iavarone, Samantha E. Lieberman, Samantha E. Lieberman, Jessica M. Ma, Jessica M. Ma, Alex Schultink, Nicholas G. Karavolias, Nicholas G. Karavolias, Stacia K. Wyman, Raj Deepika Chauhan, Nigel J. Taylor, Brian J. Staskawicz, Brian J. Staskawicz, Myeong-Je Cho, Daniel S. Rokhsar, Daniel S. Rokhsar, Daniel S. Rokhsar, Daniel S. Rokhsar, Daniel S. Rokhsar, Jessica B. Lyons, Jessica B. Lyons

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Meraculous: de novo genome assembly with short paired-end reads. by Jarrod A Chapman, Isaac Ho, Sirisha Sunkara, Shujun Luo, Gary P Schroth, Daniel S Rokhsar

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Development and Initial Characterization of a HAPPY Panel for Mapping the X. Tropicalis Genome by Zhihua Jiang, Jennifer J. Michal, Kenneth B. Beckman, Jessica B. Lyons, Ming Zhang, Zengxiang Pan, Daniel S. Rokhsar, Richard M. Harland

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Phylogenomics illuminates the evolution of bobtail and bottletail squid (order Sepiolida) by Gustavo Sanchez, Fernando Á. Fernández-Álvarez, Morag Taite, Chikatoshi Sugimoto, Jeffrey Jolly, Oleg Simakov, Ferdinand Marlétaz, Louise Allcock, Daniel S. Rokhsar

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Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta by Baosheng Wang, Julius P. Mojica, Nadeesha Perera, Cheng-Ruei Lee, John T. Lovell, Aditi Sharma, Catherine Adam, Anna Lipzen, Kerrie Barry, Daniel S. Rokhsar, Jeremy Schmutz, Thomas Mitchell-Olds

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Correction to: Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta by Baosheng Wang, Julius P. Mojica, Nadeesha Perera, Cheng-Ruei Lee, John T. Lovell, Aditi Sharma, Catherine Adam, Anna Lipzen, Kerrie Barry, Daniel S. Rokhsar, Jeremy Schmutz, Thomas Mitchell-Olds

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Tracing cancer evolution and heterogeneity using Hi-C by Dan Daniel Erdmann-Pham, Sanjit Singh Batra, Timothy K. Turkalo, James Durbin, Marco Blanchette, Iwei Yeh, Hunter Shain, Boris C. Bastian, Yun S. Song, Daniel S. Rokhsar, Dirk Hockemeyer

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Analysis of meiosis in Pristionchus pacificus reveals plasticity in homolog pairing and synapsis in the nematode lineage by Regina Rillo-Bohn, Renzo Adilardi, Therese Mitros, Barış Avşaroğlu, Lewis Stevens, Simone Köhler, Joshua Bayes, Clara Wang, Sabrina Lin, K Alienor Baskevitch, Daniel S Rokhsar, Abby F Dernburg

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Genome and transcriptome mechanisms driving cephalopod evolution by Caroline B. Albertin, Sofia Medina-Ruiz, Therese Mitros, Hannah Schmidbaur, Gustavo Sanchez, Z. Yan Wang, Jane Grimwood, Joshua J. C. Rosenthal, Clifton W. Ragsdale, Oleg Simakov, Daniel S. Rokhsar

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QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived from Manihot glaziovii by Inosters Nzuki, Inosters Nzuki, Manpreet S. Katari, Jessen V. Bredeson, Esther Masumba, Fortunus Kapinga, Kasele Salum, Geoffrey S. Mkamilo, Trushar Shah, Jessica B. Lyons, Daniel S. Rokhsar, Steve Rounsley, Alexander A. Myburg, Morag E. Ferguson

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Candidate genes for field resistance to cassava brown streak disease revealed through the analysis of multiple data sources by Morag E. Ferguson, Rodney P. Eyles, Ana Luísa Garcia-Oliveira, Fortunus Kapinga, Fortunus Kapinga, Esther A. Masumba, Esther A. Masumba, Teddy Amuge, Teddy Amuge, Jessen V. Bredeson, Daniel S. Rokhsar, Jessica B. Lyons, Trushar Shah, Steve Rounsley, Geoffrey Mkamilo

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Chromosome evolution and the genetic basis of agronomically important traits in greater yam by Jessen V. Bredeson, Jessica B. Lyons, Ibukun O. Oniyinde, Nneka R. Okereke, Olufisayo Kolade, Ikenna Nnabue, Christian O. Nwadili, Eva Hřibová, Matthew Parker, Jeremiah Nwogha, Shengqiang Shu, Joseph Carlson, Robert Kariba, Samuel Muthemba, Katarzyna Knop, Geoffrey J. Barton, Anna V. Sherwood, Antonio Lopez-Montes, Robert Asiedu, Ramni Jamnadass, Alice Muchugi, David Goodstein, Chiedozie N. Egesi, Jonathan Featherston, Asrat Asfaw, Gordon G. Simpson, Jaroslav Doležel, Prasad S. Hendre, Allen Van Deynze, Pullikanti Lava Kumar, Jude E. Obidiegwu, Ranjana Bhattacharjee, Daniel S. Rokhsar

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Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs by Jessen V. Bredeson, Austin B. Mudd, Sofia Medina-Ruiz, Therese Mitros, Owen Kabnick Smith, Kelly E. Miller, Jessica B. Lyons, Sanjit S. Batra, Joseph Park, Kodiak C. Berkoff, Christopher Plott, Jane Grimwood, Jeremy Schmutz, Guadalupe Aguirre-Figueroa, Mustafa K. Khokha, Maura Lane, Isabelle Philipp, Mara Laslo, James Hanken, Gwenneg Kerdivel, Nicolas Buisine, Laurent M. Sachs, Daniel R. Buchholz, Taejoon Kwon, Heidi Smith-Parker, Marcos Gridi-Papp, Michael J. Ryan, Robert D. Denton, John H. Malone, John B. Wallingford, Aaron F. Straight, Rebecca Heald, Dirk Hockemeyer, Richard M. Harland, Daniel S. Rokhsar

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