Developmental Stage-Specific Distribution of Macrophages in Mouse Mammary Gland Autor Teneale A. Stewart, Teneale A. Stewart, Katherine Hughes, David A. Hume, David A. Hume, Felicity M. Davis, Felicity M. Davis

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The role of CSF1R-dependent macrophages in control of the intestinal stem-cell niche Autor Anuj Sehgal, David S. Donaldson, Clare Pridans, Kristin A. Sauter, David A. Hume, Neil A. Mabbott

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Elimination of Reference Mapping Bias Reveals Robust Immune Related Allele-Specific Expression in Crossbred Sheep Autor Mazdak Salavati, Stephen J. Bush, Sergio Palma-Vera, Mary E. B. McCulloch, David A. Hume, Emily L. Clark

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Immune surveillance of the lung by migrating tissue monocytes Autor Mathieu P Rodero, Lucie Poupel, Pierre-Louis Loyher, Pauline Hamon, Fabrice Licata, Charlotte Pessel, David A Hume, Christophe Combadière, Alexandre Boissonnas

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Graphia: A platform for the graph-based visualisation and analysis of high dimensional data. Autor Tom C Freeman, Sebastian Horsewell, Anirudh Patir, Josh Harling-Lee, Tim Regan, Barbara B Shih, James Prendergast, David A Hume, Tim Angus

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Analysis of the Progeny of Sibling Matings Reveals Regulatory Variation Impacting the Transcriptome of Immune Cells in Commercial Chickens Autor Lucy Freem, Kim M. Summers, Almas A. Gheyas, Androniki Psifidi, Kay Boulton, Amanda MacCallum, Rakhi Harne, Jenny O’Dell, Stephen J. Bush, David A. Hume

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The effect of a dominant kinase-dead Csf1r mutation associated with adult-onset leukoencephalopathy on brain development and neuropathology Autor Jennifer Stables, Reiss Pal, Barry M. Bradford, Dylan Carter-Cusack, Isis Taylor, Clare Pridans, Nemat Khan, Trent M. Woodruff, Katharine M. Irvine, Kim M. Summers, Neil A. Mabbott, David A. Hume

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Mice and men: their promoter properties. Autor Vladimir B Bajic, Sin Lam Tan, Alan Christoffels, Christian Schönbach, Leonard Lipovich, Liang Yang, Oliver Hofmann, Adele Kruger, Winston Hide, Chikatoshi Kai, Jun Kawai, David A Hume, Piero Carninci, Yoshihide Hayashizaki

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Squamous cell carcinoma is associated with reduced IL34 expression, alterations in the Langerhans cell antigen‐processing‐presentation machinery and poor patient survival Autor Thi Viet Trinh Dang, Kevin R Gillinder, Quan Nguyen, Onkar Mulay, Tuan Vo, Ahmed M Mehdi, Chenhao Zhou, Andrew J Brooks, Graham R Leggatt, David A Hume, Ian H Frazer, Janin Chandra

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Functional Annotation of the Transcriptome of the Pig, Sus scrofa, Based Upon Network Analysis of an RNAseq Transcriptional Atlas Autor Kim M. Summers, Stephen J. Bush, Chunlei Wu, Andrew I. Su, Charity Muriuki, Emily L. Clark, Heather A. Finlayson, Lel Eory, Lindsey A. Waddell, Richard Talbot, Alan L. Archibald, David A. Hume

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Species-Specificity of Transcriptional Regulation and the Response to Lipopolysaccharide in Mammalian Macrophages Autor Stephen J. Bush, Mary E. B. McCulloch, Zofia M. Lisowski, Charity Muriuki, Emily L. Clark, Rachel Young, Clare Pridans, Clare Pridans, James G. D. Prendergast, Kim M. Summers, David A. Hume

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The Transcriptional Network That Controls Growth Arrest and Macrophage Differentiation in the Human Myeloid Leukemia Cell Line THP-1 Autor Iveta Gažová, Lucas Lefevre, Stephen J. Bush, Sara Clohisey, Erik Arner, Michiel de Hoon, Jessica Severin, Lucas van Duin, Robin Andersson, Andreas Lengeling, David A. Hume, Kim M. Summers, Kim M. Summers

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Wild-type bone marrow cells repopulate tissue resident macrophages and reverse the impacts of homozygous CSF1R mutation. Autor Dylan Carter-Cusack, Stephen Huang, Sahar Keshvari, Omkar Patkar, Anuj Sehgal, Rachel Allavena, Robert A J Byrne, B Paul Morgan, Stephen J Bush, Kim M Summers, Katharine M Irvine, David A Hume

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Antigen Sampling CSF1R-Expressing Epithelial Cells Are the Functional Equivalents of Mammalian M Cells in the Avian Follicle-Associated Epithelium Autor Adam Balic, Adam Balic, Cosmin Chintoan-Uta, Prerna Vohra, Kate M. Sutton, Robin L. Cassady-Cain, Tuan Hu, David S. Donaldson, Mark P. Stevens, Neil A. Mabbott, David A. Hume, Helen M. Sang, Lonneke Vervelde

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Phenotypic and genetic variation in the response of chickens to Eimeria tenella induced coccidiosis Autor Kay Boulton, Matthew J. Nolan, Zhiguang Wu, Androniki Psifidi, Valentina Riggio, Kimberley Harman, Stephen C. Bishop, Pete Kaiser, Mitchell S. Abrahamsen, Rachel Hawken, Kellie A. Watson, Fiona M. Tomley, Damer P. Blake, David A. Hume

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Development of a DNA barcode tagging method for monitoring dynamic changes in gene expression by using an ultra high-throughput sequencer Autor Norihiro Maeda, Hiromi Nishiyori, Mari Nakamura, Chika Kawazu, Mitsuyoshi Murata, Hiromi Sano, Kengo Hayashida, Shiro Fukuda, Michihira Tagami, Akira Hasegawa, Kayoko Murakami, Kate Schroder, Katharine Irvine, David A. Hume, Yoshihide Hayashizaki, Piero Carninci, Harukazu Suzuki

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A Mini-Atlas of Gene Expression for the Domestic Goat (Capra hircus) Autor Charity Muriuki, Charity Muriuki, Stephen J. Bush, Stephen J. Bush, Mazdak Salavati, Mazdak Salavati, Mary E.B. McCulloch, Zofia M. Lisowski, Morris Agaba, Appolinaire Djikeng, David A. Hume, Emily L. Clark, Emily L. Clark

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Network analysis reveals distinct clinical syndromes underlying acute mountain sickness. Autor David P Hall, Ian J C MacCormick, Alex T Phythian-Adams, Nina M Rzechorzek, David Hope-Jones, Sorrel Cosens, Stewart Jackson, Matthew G D Bates, David J Collier, David A Hume, Thomas Freeman, A A Roger Thompson, John Kenneth Baillie

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Prediction of altered 3'- UTR miRNA-binding sites from RNA-Seq data: the swine leukocyte antigen complex (SLA) as a model region. Autor Marie-Laure Endale Ahanda, Eric R Fritz, Jordi Estellé, Zhi-Liang Hu, Ole Madsen, Martien A M Groenen, Dario Beraldi, Ronan Kapetanovic, David A Hume, Robert R R Rowland, Joan K Lunney, Claire Rogel-Gaillard, James M Reecy, Elisabetta Giuffra

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Increased ultra-rare variant load in an isolated Scottish population impacts exonic and regulatory regions. Autor Mihail Halachev, Alison Meynert, Martin S Taylor, Veronique Vitart, Shona M Kerr, Lucija Klaric, S. G. P. Consortium, Timothy J Aitman, Chris S Haley, James G Prendergast, Carys Pugh, David A Hume, Sarah E Harris, David C Liewald, Ian J Deary, Colin A Semple, James F Wilson

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