Coupling adaptive molecular evolution to phylodynamics using fitness-dependent birth-death models by David A Rasmussen, Tanja Stadler

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The effects of a deleterious mutation load on patterns of influenza A/H3N2's antigenic evolution in humans by Katia Koelle, David A Rasmussen

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Recombination-aware phylogeographic inference using the structured coalescent with ancestral recombination. by Fangfang Guo, Ignazio Carbone, David A Rasmussen

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Inference for nonlinear epidemiological models using genealogies and time series. by David A Rasmussen, Oliver Ratmann, Katia Koelle

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Phylodynamic inference for structured epidemiological models. by David A Rasmussen, Erik M Volz, Katia Koelle

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Aphid Transmission of <i>Potyvirus</i>: The Largest Plant-Infecting RNA Virus Genus by Kiran R. Gadhave, Saurabh Gautam, David A. Rasmussen, Rajagopalbabu Srinivasan

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Phylodynamics on local sexual contact networks. by David A Rasmussen, Roger Kouyos, Huldrych F Günthard, Tanja Stadler

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Plasmodium falciparum Genetic Diversity in Coincident Human and Mosquito Hosts by Zena Lapp, Andrew A. Obala, Lucy Abel, David A. Rasmussen, Kelsey M. Sumner, Elizabeth Freedman, Steve M. Taylor, Wendy Prudhomme-O’Meara

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Epidemiology of Plasmid Lineages Mediating the Spread of Extended-Spectrum Beta-Lactamases among Clinical Escherichia coli by Bejan Mahmud, Meghan A. Wallace, Kimberly A. Reske, Kelly Alvarado, Carol E. Muenks, David A. Rasmussen, Carey-Ann D. Burnham, Cristina Lanzas, Erik R. Dubberke, Gautam Dantas

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HIV-1 molecular diversity in Brazil unveiled by 10 years of sampling by the national genotyping network by Tiago Gräf, Gonzalo Bello, Paula Andrade, Ighor Arantes, João Marcos Pereira, Alexandre Bonfim Pinheiro da Silva, Rafael V. Veiga, Diana Mariani, Lídia Theodoro Boullosa, Mônica B. Arruda, José Carlos Couto Fernandez, Ann M. Dennis, David A. Rasmussen, Amilcar Tanuri

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