Unlocking the origins and biology of domestic animals using ancient DNA and paleogenomics by Gillian P. McHugo, Michael J. Dover, David E. MacHugh

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Timing of Transcriptomic Peripheral Blood Mononuclear Cell Responses of Sheep to Fasciola hepatica Infection Differs From Those of Cattle, Reflecting Different Disease Phenotypes by Dagmara A. Niedziela, Amalia Naranjo-Lucena, Verónica Molina-Hernández, John A. Browne, Álvaro Martínez-Moreno, José Pérez, David E. MacHugh, David E. MacHugh, Grace Mulcahy, Grace Mulcahy

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Fasciola hepatica Infection in Cattle: Analyzing Responses of Peripheral Blood Mononuclear Cells (PBMC) Using a Transcriptomics Approach by Andres Garcia-Campos, Carolina N. Correia, Amalia Naranjo-Lucena, Laura Garza-Cuartero, Gabriella Farries, John A. Browne, David E. MacHugh, David E. MacHugh, Grace Mulcahy, Grace Mulcahy

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Alveolar Macrophage Chromatin Is Modified to Orchestrate Host Response to Mycobacterium bovis Infection by Thomas J. Hall, Douglas Vernimmen, John A. Browne, Michael P. Mullen, Stephen V. Gordon, Stephen V. Gordon, David E. MacHugh, David E. MacHugh, Alan M. O’Doherty

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Transcriptomic Analysis of Ovine Hepatic Lymph Node Following Fasciola hepatica Infection – Inhibition of NK Cell and IgE-Mediated Signaling by Amalia Naranjo-Lucena, Carolina N. Correia, Verónica Molina-Hernández, Álvaro Martínez-Moreno, John A. Browne, José Pérez, David E. MacHugh, David E. MacHugh, Grace Mulcahy, Grace Mulcahy

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Comparative functional genomics and the bovine macrophage response to strains of the Mycobacterium genus by Kévin eRue-Albrecht, David A. Magee, David A. Magee, Kate E. Killick, Kate E. Killick, Nicolas C. Nalpas, Stephen V. Gordon, Stephen V. Gordon, David E. Machugh, David E. Machugh

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RNA Sequencing (RNA-Seq) Reveals Extremely Low Levels of Reticulocyte-Derived Globin Gene Transcripts in Peripheral Blood From Horses (Equus caballus) and Cattle (Bos taurus) by Carolina N. Correia, Kirsten E. McLoughlin, Nicolas C. Nalpas, David A. Magee, John A. Browne, Kevin Rue-Albrecht, Stephen V. Gordon, Stephen V. Gordon, David E. MacHugh, David E. MacHugh

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Expression Quantitative Trait Loci in Equine Skeletal Muscle Reveals Heritable Variation in Metabolism and the Training Responsive Transcriptome by Gabriella Farries, Kenneth Bryan, Charlotte L. McGivney, Paul A. McGettigan, Katie F. Gough, John A. Browne, David E. MacHugh, David E. MacHugh, Lisa Michelle Katz, Emmeline W. Hill, Emmeline W. Hill

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Genomic Characterisation of the Indigenous Irish Kerry Cattle Breed by Sam Browett, Gillian McHugo, Ian W. Richardson, David A. Magee, Stephen D. E. Park, Alan G. Fahey, John F. Kearney, Carolina N. Correia, Imtiaz A. S. Randhawa, David E. MacHugh, David E. MacHugh

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The Identification of Circulating MiRNA in Bovine Serum and Their Potential as Novel Biomarkers of Early Mycobacterium avium subsp paratuberculosis Infection. by Damien Farrell, Ronan G Shaughnessy, Louise Britton, David E MacHugh, Bryan Markey, Stephen V Gordon

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Preferential differential gene expression within the WC1.1+ γδ T cell compartment in cattle naturally infected with Mycobacterium bovis by Sajad A. Bhat, Sajad A. Bhat, Sajad A. Bhat, Mahmoud Elnaggar, Thomas J. Hall, Gillian P. McHugo, Cian Reid, David E. MacHugh, David E. MacHugh, Kieran G. Meade, Kieran G. Meade, Kieran G. Meade

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A genome scan for positive selection in thoroughbred horses. by Jingjing Gu, Nick Orr, Stephen D Park, Lisa M Katz, Galina Sulimova, David E MacHugh, Emmeline W Hill

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A Population Genomics Analysis of the Native Irish Galway Sheep Breed by Gillian P. McHugo, Sam Browett, Imtiaz A. S. Randhawa, Dawn J. Howard, Michael P. Mullen, Ian W. Richardson, Stephen D. E. Park, David A. Magee, Erik Scraggs, Michael J. Dover, Carolina N. Correia, James P. Hanrahan, David E. MacHugh, David E. MacHugh

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Selection in Australian Thoroughbred horses acts on a locus associated with early two-year old speed. by Haige Han, Beatrice A McGivney, Gabriella Farries, Lisa M Katz, David E MacHugh, Imtiaz A S Randhawa, Emmeline W Hill

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Selection signatures for local and regional adaptation in Chinese Mongolian horse breeds reveal candidate genes for hoof health by Haige Han, Imtiaz A. S. Randhawa, David E. MacHugh, Beatrice A. McGivney, Lisa M. Katz, Manglai Dugarjaviin, Emmeline W. Hill

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Analysis of the bovine monocyte-derived macrophage response to Mycobacterium avium subspecies paratuberculosis infection using RNA-seq by Maura E Casey, Maura E Casey, Kieran G. Meade, Nicolas C Nalpas, Maria eTaraktsoglou, John A Browne, Kate E Killick, Kate E Killick, Stephen David Edward Park, Stephen David Edward Park, Eamonn eGormley, Karsten eHokamp, David A Magee, David A Magee, David E Machugh, David E Machugh

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Identification of novel molecular markers of mastitis caused by Staphylococcus aureus using gene expression profiling in two consecutive generations of Chinese Holstein dairy cattl... by Di Wang, Lei Liu, Serafino M. A. Augustino, Tao Duan, Thomas J. Hall, David E. MacHugh, Jinhuan Dou, Yi Zhang, Yachun Wang, Ying Yu

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A sequence polymorphism in MSTN predicts sprinting ability and racing stamina in thoroughbred horses. by Emmeline W Hill, Jingjing Gu, Suzanne S Eivers, Rita G Fonseca, Beatrice A McGivney, Preethi Govindarajan, Nick Orr, Lisa M Katz, David E MacHugh

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Transcriptomics analysis of the bovine endometrium during the perioestrus period. by Mohammed A Alfattah, Carolina N Correia, John A Browne, Paul A McGettigan, Katarzyna Pluta, Stephen D Carrington, David E MacHugh, Jane A Irwin

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Correction: A Sequence Polymorphism in Predicts Sprinting Ability and Racing Stamina in Thoroughbred Horses. by Emmeline W. Hill, Jingjing Gu, Suzanne S. Eivers, Rita G. Fonseca, Beatrice A. McGivney, Preethi Govindarajan, Nick Orr, Lisa M. Katz, David E. MacHugh

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