Proteogenomics unveils mechanistic insights to precision oncology by Yongchao Dou, Lizabeth Katsnelson, Bing Zhang, David Fenyö, Tao Liu

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Prediction of Maternal Hemorrhage Using Machine Learning: Retrospective Cohort Study by Jill M Westcott, Francine Hughes, Wenke Liu, Mark Grivainis, Iffath Hoskins, David Fenyo

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GINS motion reveals replication fork progression is remarkably uniform throughout the yeast genome by Matthew D Sekedat, David Fenyö, Richard S Rogers, Alan J Tackett, John D Aitchison, Brian T Chait

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MED19 encodes two unique protein isoforms that confer prostate cancer growth under low androgen through distinct gene expression programs by Rachel Ruoff, Hannah Weber, Ying Wang, Hongying Huang, Ellen Shapiro, David Fenyö, Michael J. Garabedian

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Few-shot genes selection: subset of PAM50 genes for breast cancer subtypes classification by Leandro Y. S. Okimoto, Rayol Mendonca-Neto, Fabíola G. Nakamura, Eduardo F. Nakamura, David Fenyö, Claudio T. Silva

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Predictive Modeling of Morbidity and Mortality in Patients Hospitalized With COVID-19 and its Clinical Implications: Algorithm Development and Interpretation by Joshua M Wang, Wenke Liu, Xiaoshan Chen, Michael P McRae, John T McDevitt, David Fenyö

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A Complex Systems Approach to Causal Discovery in Psychiatry. by Glenn N Saxe, Alexander Statnikov, David Fenyo, Jiwen Ren, Zhiguo Li, Meera Prasad, Dennis Wall, Nora Bergman, Ernestine C Briggs, Constantin Aliferis

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Simultaneous Quantitative SARS-CoV-2 Antigen and Host Antibody Detection and Pre-Screening Strategy at the Point of Care by Kritika Srinivasan Rajsri, Michael P. McRae, Nicolaos J. Christodoulides, Isaac Dapkins, Glennon W. Simmons, Hanover Matz, Helen Dooley, David Fenyö, John T. McDevitt

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LINE-1 protein localization and functional dynamics during the cell cycle by Paolo Mita, Aleksandra Wudzinska, Xiaoji Sun, Joshua Andrade, Shruti Nayak, David J Kahler, Sana Badri, John LaCava, Beatrix Ueberheide, Chi Y Yun, David Fenyö, Jef D Boeke

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Dormant origin firing promotes head-on transcription-replication conflicts at transcription termination sites in response to BRCA2 deficiency by Liana Goehring, Sarah Keegan, Sudipta Lahiri, Wenxin Xia, Michael Kong, Judit Jimenez-Sainz, Dipika Gupta, Ronny Drapkin, Ryan B. Jensen, Duncan J. Smith, Eli Rothenberg, David Fenyö, Tony T. Huang

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Engineered transcription-associated Cas9 targeting in eukaryotic cells by Gregory W. Goldberg, Manjunatha Kogenaru, Sarah Keegan, Max A. B. Haase, Larisa Kagermazova, Mauricio A. Arias, Kenenna Onyebeke, Samantha Adams, Daniel K. Beyer, David Fenyö, Marcus B. Noyes, Jef D. Boeke

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Modulation of GPR133 (ADGRD1) signaling by its intracellular interaction partner extended synaptotagmin 1 by Gabriele Stephan, Sara Haddock, Shuai Wang, Hediye Erdjument-Bromage, Wenke Liu, Niklas Ravn-Boess, Joshua D. Frenster, Devin Bready, Julia Cai, Rebecca Ronnen, Jonathan Sabio-Ortiz, David Fenyo, Thomas A. Neubert, Dimitris G. Placantonakis

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Dissection of affinity captured LINE-1 macromolecular complexes by Martin S Taylor, Ilya Altukhov, Kelly R Molloy, Paolo Mita, Hua Jiang, Emily M Adney, Aleksandra Wudzinska, Sana Badri, Dmitry Ischenko, George Eng, Kathleen H Burns, David Fenyö, Brian T Chait, Dmitry Alexeev, Michael P Rout, Jef D Boeke, John LaCava

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PTK7 is a positive allosteric modulator of GPR133 signaling in glioblastoma by Joshua D. Frenster, Hediye Erdjument-Bromage, Gabriele Stephan, Niklas Ravn-Boess, Shuai Wang, Wenke Liu, Devin Bready, Jordan Wilcox, Björn Kieslich, Manuel Jankovic, Caroline Wilde, Susanne Horn, Norbert Sträter, Ines Liebscher, Torsten Schöneberg, David Fenyo, Thomas A. Neubert, Dimitris G. Placantonakis

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Mitochondrial and immune response dysregulation in melanoma recurrence by Leticia Szadai, Jéssica de Siqueira Guedes, Nicole Woldmar, Natália Pinto deAlmeida, Ágnes Judit Jánosi, Ahmad Rajeh, Ferenc Kovács, András Kriston, Ede Migh, Guihong Wan, Nga Nguyen, Henriett Oskolás, Roger Appelqvist, Fábio CN Nogueira, Gilberto B Domont, Kun‐Hsing Yu, Eugene R. Semenov, Johan Malm, Melinda Rezeli, Elisabet Wieslander, David Fenyö, Lajos Kemény, Peter Horvath, István Balázs Németh, György Marko‐Varga, Jeovanis Gil

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The expression profile and tumorigenic mechanisms of CD97 (ADGRE5) in glioblastoma render it a targetable vulnerability by Niklas Ravn-Boess, Nainita Roy, Takamitsu Hattori, Devin Bready, Hayley Donaldson, Christopher Lawson, Cathryn Lapierre, Aryeh Korman, Tori Rodrick, Enze Liu, Joshua D. Frenster, Gabriele Stephan, Jordan Wilcox, Alexis D. Corrado, Julia Cai, Rebecca Ronnen, Shuai Wang, Sara Haddock, Jonathan Sabio Ortiz, Orin Mishkit, Alireza Khodadadi-Jamayran, Aris Tsirigos, David Fenyö, David Zagzag, Julia Drube, Carsten Hoffmann, Fabiana Perna, Drew R. Jones, Richard Possemato, Akiko Koide, Shohei Koide, Christopher Y. Park, Dimitris G. Placantonakis

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Mitochondrial dysfunction and immune suppression in BRAF V600E‐mutated metastatic melanoma by Natália Pinto de Almeida, Ágnes Judit Jánosi, Runyu Hong, Ahmad Rajeh, Fábio Nogueira, Leticia Szadai, Beata Szeitz, Indira Pla Parada, Viktória Doma, Nicole Woldmar, Jéssica Guedes, Zsuzsanna Újfaludi, Aron Bartha, Yonghyo Kim, Charlotte Welinder, Bo Baldetorp, Lajos Vince Kemény, Zoltan Pahi, Guihong Wan, Nga Nguyen, Tibor Pankotai, Balázs Győrffy, Krzysztof Pawłowski, Peter Horvatovich, Attila Marcell Szasz, Aniel Sanchez, Magdalena Kuras, Jimmy Rodriguez Murillo, Lazaro Betancourt, Gilberto B. Domont, Yevgeniy R. Semenov, Kun‐Hsing Yu, Ho Jeong Kwon, István Balázs Németh, David Fenyő, Elisabet Wieslander, György Marko‐Varga, Jeovanis Gil

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The Human Melanoma Proteome Atlas—Complementing the melanoma transcriptome by Lazaro Hiram Betancourt, Jeovanis Gil, Aniel Sanchez, Viktória Doma, Magdalena Kuras, Jimmy Rodriguez Murillo, Erika Velasquez, Uğur Çakır, Yonghyo Kim, Yutaka Sugihara, Indira Pla Parada, Beáta Szeitz, Roger Appelqvist, Elisabet Wieslander, Charlotte Welinder, Natália Pinto deAlmeida, Nicole Woldmar, Matilda Marko‐Varga, Jonatan Eriksson, Krzysztof Pawłowski, Bo Baldetorp, Christian Ingvar, Håkan Olsson, Lotta Lundgren, Henrik Lindberg, Henriett Oskolas, Boram Lee, Ethan Berge, Marie Sjögren, Carina Eriksson, Dasol Kim, Ho Jeong Kwon, Beatrice Knudsen, Melinda Rezeli, Johan Malm, Runyu Hong, Peter Horvath, A. Marcell Szász, József Tímár, Sarolta Kárpáti, Peter Horvatovich, Tasso Miliotis, Toshihide Nishimura, Harubumi Kato, Erik Steinfelder, Madalina Oppermann, Ken Miller, Francesco Florindi, Quimin Zhou, Gilberto B. Domont, Luciana Pizzatti, Fábio C. S. Nogueira, Leticia Szadai, István Balázs Németh, Henrik Ekedahl, David Fenyö, György Marko‐Varga

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Predicting immune checkpoint therapy response in three independent metastatic melanoma cohorts by Leticia Szadai, Aron Bartha, Aron Bartha, Indira Pla Parada, Alexandra I.T. Lakatos, Alexandra I.T. Lakatos, Alexandra I.T. Lakatos, Dorottya M.P. Pál, Dorottya M.P. Pál, Dorottya M.P. Pál, Anna Sára Lengyel, Anna Sára Lengyel, Anna Sára Lengyel, Natália Pinto de Almeida, Natália Pinto de Almeida, Ágnes Judit Jánosi, Fábio Nogueira, Beata Szeitz, Viktória Doma, Nicole Woldmar, Nicole Woldmar, Jéssica Guedes, Jéssica Guedes, Zsuzsanna Ujfaludi, Zsuzsanna Ujfaludi, Zoltán Gábor Pahi, Zoltán Gábor Pahi, Zoltán Gábor Pahi, Tibor Pankotai, Tibor Pankotai, Tibor Pankotai, Yonghyo Kim, Balázs Győrffy, Balázs Győrffy, Bo Baldetorp, Charlotte Welinder, A. Marcell Szasz, Lazaro Betancourt, Jeovanis Gil, Roger Appelqvist, Ho Jeong Kwon, Sarolta Kárpáti, Magdalena Kuras, Jimmy Rodriguez Murillo, István Balázs Németh, Johan Malm, David Fenyö, Krzysztof Pawłowski, Peter Horvatovich, Elisabet Wieslander, Lajos V. Kemény, Lajos V. Kemény, Lajos V. Kemény, Gilberto Domont, György Marko-Varga, György Marko-Varga, Aniel Sanchez

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