Differential chromatin profiles partially determine transcription factor binding. by Rujian Chen, David K Gifford

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Discovering differential genome sequence activity with interpretable and efficient deep learning. by Jennifer Hammelman, David K Gifford

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High resolution genome wide binding event finding and motif discovery reveals transcription factor spatial binding constraints. by Yuchun Guo, Shaun Mahony, David K Gifford

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Visualizing complex feature interactions and feature sharing in genomic deep neural networks by Ge Liu, Haoyang Zeng, David K. Gifford

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A high-throughput yeast display approach to profile pathogen proteomes for MHC-II binding by Brooke D Huisman, Zheng Dai, David K Gifford, Michael E Birnbaum

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Control of transcription by cell size. by Chia-Yung Wu, P Alexander Rolfe, David K Gifford, Gerald R Fink

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Cas9 Functionally Opens Chromatin. by Amira A Barkal, Sharanya Srinivasan, Tatsunori Hashimoto, David K Gifford, Richard I Sherwood

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Ruler arrays reveal haploid genomic structural variation. by P Alexander Rolfe, Douglas A Bernstein, Paula Grisafi, Gerald R Fink, David K Gifford

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MARIS: method for analyzing RNA following intracellular sorting. by Siniša Hrvatin, Francis Deng, Charles W O'Donnell, David K Gifford, Douglas A Melton

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Machine learning based CRISPR gRNA design for therapeutic exon skipping. by Wilson Louie, Max W Shen, Zakir Tahiry, Sophia Zhang, Daniel Worstell, Christopher A Cassa, Richard I Sherwood, David K Gifford

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Small molecule inhibition of ATM kinase increases CRISPR-Cas9 1-bp insertion frequency by Heysol C. Bermudez-Cabrera, Sannie Culbertson, Sammy Barkal, Benjamin Holmes, Max W. Shen, Sophia Zhang, David K. Gifford, Richard I. Sherwood

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Transcriptional dynamics of murine motor neuron maturation in vivo and in vitro by Tulsi Patel, Jennifer Hammelman, Siaresh Aziz, Sumin Jang, Michael Closser, Theodore L. Michaels, Jacob A. Blum, David K. Gifford, Hynek Wichterle

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A pan-variant mRNA-LNP T cell vaccine protects HLA transgenic mice from mortality after infection with SARS-CoV-2 Beta by Brandon Carter, Brandon Carter, Pinghan Huang, Ge Liu, Ge Liu, Yuejin Liang, Paulo J. C. Lin, Bi-Hung Peng, Lindsay G. A. McKay, Alexander Dimitrakakis, Alexander Dimitrakakis, Jason Hsu, Vivian Tat, Panatda Saenkham-Huntsinger, Jinjin Chen, Clarety Kaseke, Gaurav D. Gaiha, Gaurav D. Gaiha, Qiaobing Xu, Anthony Griffiths, Ying K. Tam, Chien-Te K. Tseng, Chien-Te K. Tseng, Chien-Te K. Tseng, David K. Gifford, David K. Gifford, David K. Gifford

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Wnt Signaling Separates the Progenitor and Endocrine Compartments during Pancreas Development by Nadav Sharon, Jordan Vanderhooft, Juerg Straubhaar, Jonas Mueller, Raghav Chawla, Quan Zhou, Elise N. Engquist, Cole Trapnell, David K. Gifford, Douglas A. Melton

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Detection of gene cis-regulatory element perturbations in single-cell transcriptomes. by Grace Hui Ting Yeo, Oscar Juez, Qing Chen, Budhaditya Banerjee, Lendy Chu, Max W Shen, May Sabry, Ive Logister, Richard I Sherwood, David K Gifford

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Chemogenetic System Demonstrates That Cas9 Longevity Impacts Genome Editing Outcomes by Vedagopuram Sreekanth, Qingxuan Zhou, Praveen Kokkonda, Heysol C. Bermudez-Cabrera, Donghyun Lim, Benjamin K. Law, Benjamin R. Holmes, Santosh K. Chaudhary, Rajaiah Pergu, Brittany S. Leger, James A. Walker, David K. Gifford, Richard I. Sherwood, Amit Choudhary

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Information-sharing models for computational genetics by Edwards, Matthew Douglas

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An analysis of community information systems by Heitmann, Dawn M. (Dawn Marie)

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An automatic news article editor by Côté, Robert G. (Robert Gerard)

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Content-based access to algebraic video by Weiss, Ron, 1970-

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