Fast analysis of scATAC-seq data using a predefined set of genomic regions [version 2; peer review: 2 approved] by Valentina Giansanti, Ming Tang, Davide Cittaro

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Nested Stochastic Block Models applied to the analysis of single cell data by Leonardo Morelli, Valentina Giansanti, Davide Cittaro

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Chromas from chromatin: sonification of the epigenome [version 1; referees: 1 approved, 2 approved with reservations] by Davide Cittaro, Dejan Lazarevic, Paolo Provero

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Analyzing genomic and epigenetic profiles in single cells by hybrid transposase (scGET-seq) by Davide Cittaro, Dejan Lazarević, Giovanni Tonon, Francesca Giannese

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The frequency of somatic mutations in cancer predicts the phenotypic relevance of germline mutations by Edoardo Luigi Draetta, Edoardo Luigi Draetta, Dejan Lazarević, Paolo Provero, Paolo Provero, Davide Cittaro

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A novel truncating variant of GLI2 associated with Culler-Jones syndrome impairs Hedgehog signalling. by Fabiola Valenza, Davide Cittaro, Elia Stupka, Donatella Biancolini, Maria Grazia Patricelli, Dario Bonanomi, Dejan Lazarević

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Gene Expression Analysis in Patients with Cocaine-Induced Midline Destructive Lesions by Matteo Trimarchi, Giacomo Bertazzoni, Alessandro Vinciguerra, Celia Pardini, Fabio Simeoni, Davide Cittaro, Mario Bussi, Dejan Lazarevic

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Transcription factor binding sites are genetic determinants of retroviral integration in the human genome. by Barbara Felice, Claudia Cattoglio, Davide Cittaro, Anna Testa, Annarita Miccio, Giuliana Ferrari, Lucilla Luzi, Alessandra Recchia, Fulvio Mavilio

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Amino acid deprivation triggers a novel GCN2-independent response leading to the transcriptional reactivation of non-native DNA sequences. by Annarosaria De Vito, Massimo Lazzaro, Ilaria Palmisano, Davide Cittaro, Michela Riba, Dejan Lazarevic, Dejan Lazarevic, Makoto Bannai, Davide Gabellini, Maria Vittoria Schiaffino

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Lentiviral vectors escape innate sensing but trigger p53 in human hematopoietic stem and progenitor cells by Francesco Piras, Michela Riba, Carolina Petrillo, Dejan Lazarevic, Ivan Cuccovillo, Sara Bartolaccini, Elia Stupka, Bernhard Gentner, Davide Cittaro, Luigi Naldini, Anna Kajaste‐Rudnitski

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Autosomal Dominant Tubulointerstitial Kidney Disease with Adult Onset due to a Novel Renin Mutation Mapping in the Mature Protein by Céline Schaeffer, Claudia Izzi, Andrea Vettori, Elena Pasqualetto, Davide Cittaro, Dejan Lazarevic, Gianluca Caridi, Barbara Gnutti, Cinzia Mazza, Luca Jovine, Francesco Scolari, Luca Rampoldi

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Genome wide identification of aberrant alternative splicing events in myotonic dystrophy type 2. by Alessandra Perfetti, Simona Greco, Pasquale Fasanaro, Enrico Bugiardini, Rosanna Cardani, Jose M Garcia-Manteiga, Michela Riba, Davide Cittaro, Elia Stupka, Giovanni Meola, Fabio Martelli

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A strong anti-inflammatory signature revealed by liver transcription profiling of Tmprss6-/- mice. by Michela Riba, Marco Rausa, Melissa Sorosina, Davide Cittaro, Jose Manuel Garcia Manteiga, Antonella Nai, Alessia Pagani, Filippo Martinelli-Boneschi, Elia Stupka, Clara Camaschella, Laura Silvestri

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Interferon gene therapy reprograms the leukemia microenvironment inducing protective immunity to multiple tumor antigens by Giulia Escobar, Luigi Barbarossa, Giulia Barbiera, Margherita Norelli, Marco Genua, Anna Ranghetti, Tiziana Plati, Barbara Camisa, Chiara Brombin, Davide Cittaro, Andrea Annoni, Attilio Bondanza, Renato Ostuni, Bernhard Gentner, Luigi Naldini

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Neural precursor cells tune striatal connectivity through the release of IGFBPL1 by Erica Butti, Stefano Cattaneo, Marco Bacigaluppi, Marco Cambiaghi, Giulia Maria Scotti, Elena Brambilla, Francesca Ruffini, Giacomo Sferruzza, Maddalena Ripamonti, Fabio Simeoni, Laura Cacciaguerra, Aurora Zanghì, Angelo Quattrini, Riccardo Fesce, Paola Panina-Bordignon, Francesca Giannese, Davide Cittaro, Tanja Kuhlmann, Patrizia D’Adamo, Maria Assunta Rocca, Stefano Taverna, Gianvito Martino

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Early tolerance and late persistence as alternative drug responses in cancer by Simona Punzi, Davide Cittaro, Guido Gatti, Gemma Crupi, Oronza A. Botrugno, Antonino Alex Cartalemi, Alon Gutfreund, Caterina Oneto, Valentina Giansanti, Chiara Battistini, Giovanni Santacatterina, Lucrezia Patruno, Ilaria Villanti, Martina Palumbo, Daniel J. Laverty, Francesca Giannese, Alex Graudenzi, Giulio Caravagna, Marco Antoniotti, Zachary Nagel, Ugo Cavallaro, Luisa Lanfrancone, Timothy A. Yap, Giulio Draetta, Nathalie Balaban, Giovanni Tonon

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