Ultra-deep sequencing of intra-host rabies virus populations during cross-species transmission. by Monica K Borucki, Haiyin Chen-Harris, Victoria Lao, Gilda Vanier, Debra A Wadford, Sharon Messenger, Jonathan E Allen

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Evaluation of co-circulating pathogens and microbiome from COVID-19 infections by James B. Thissen, Michael D. Morrison, Nisha Mulakken, William C. Nelson, Chris Daum, Sharon Messenger, Debra A. Wadford, Crystal Jaing

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Evaluation of co-circulating pathogens and microbiome from COVID-19 infections. by James B Thissen, Michael D Morrison, Nisha Mulakken, William C Nelson, Chris Daum, Sharon Messenger, Debra A Wadford, Crystal Jaing

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Effectiveness of Abbott BinaxNOW Rapid Antigen Test for Detection of SARS-CoV-2 Infections in Outbreak among Horse Racetrack Workers, California, USA by Krishna Surasi, Kristin J. Cummings, Carl Hanson, Mary Kate Morris, Maria Salas, David Seftel, Liza Ortiz, Ruwan Thilakaratne, Cameron Stainken, Debra A. Wadford

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Computational and serologic analysis of novel and known viruses in species human adenovirus D in which serology and genomics do not correlate. by Elizabeth B Liu, Debra A Wadford, Jason Seto, Maria Vu, Nolan Ryan Hudson, Lisa Thrasher, Sarah Torres, David W Dyer, James Chodosh, Donald Seto, Morris S Jones

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Variation of human immunodeficiency virus type-1 reverse transcriptase within the simian immunodeficiency virus genome of RT-SHIV. by Debra A Wadford, Robert C Kauffman, Jesse D Deere, Scott T Aoki, Richard A Stanton, Joanne Higgins, Koen K A Van Rompay, Andradi Villalobos, James H Nettles, Raymond F Schinazi, Niels C Pedersen, Thomas W North

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Trends of Enterovirus D68 Concentrations in Wastewater, California, USA, February 2021–April 2023 by Alexandria B. Boehm, Debra A. Wadford, Bridgette Hughes, Dorothea Duong, Alice Chen, Tasha Padilla, Chelsea Wright, Lisa Moua, Teal Bullick, Maria Salas, Christina Morales, Bradley J. White, Carol A. Glaser, Duc J. Vugia, Alexander T. Yu, Marlene K. Wolfe

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Multiple Mutations Associated with Emergent Variants Can Be Detected as Low-Frequency Mutations in Early SARS-CoV-2 Pandemic Clinical Samples by Jeffrey Kimbrel, Joseph Moon, Aram Avila-Herrera, Jose Manuel Martí, James Thissen, Nisha Mulakken, Sarah H. Sandholtz, Tyshawn Ferrell, Chris Daum, Sara Hall, Brent Segelke, Kathryn T. Arrildt, Sharon Messenger, Debra A. Wadford, Crystal Jaing, Jonathan E. Allen, Monica K. Borucki

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Severe Acute Respiratory Syndrome Coronavirus 2 and Respiratory Virus Sentinel Surveillance, California, USA, May 10, 2020–June 12, 2021 by Gail L. Sondermeyer Cooksey, Christina Morales, Lauren Linde, Samuel Schildhauer, Hugo Guevara, Elena Chan, Kathryn Gibb, Jessie Wong, Wen Lin, Brandon J. Bonin, Olivia Arizmendi, Tracy Lam-Hine, Ori Tzvieli, Ann McDowell, Kirstie M. Kampen, Denise L. Lopez, Josh Ennis, Linda S. Lewis, Eyal Oren, April Hatada, Blanca Molinar, Matt Frederick, George S. Han, Martha Sanchez, Michael A. Garcia, Alana McGrath, Nga Q. Le, Eric Boyd, Regina M. Bertolucci, Jeremy Corrigan, Stephanie Brodine, Michael Austin, William R. K. Roach, Robert M. Levin, Brian M. Tyson, Jake M. Pry, Kristin J. Cummings, Debra A. Wadford, Seema Jain

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Implementation of California COVIDNet – a multi-sector collaboration for statewide SARS-CoV-2 genomic surveillance by Debra A. Wadford, Nikki Baumrind, Elizabeth F. Baylis, John M. Bell, Ellen L. Bouchard, Megan Crumpler, Eric M. Foote, Sabrina Gilliam, Carol A. Glaser, Jill K. Hacker, Katya Ledin, Sharon L. Messenger, Christina Morales, Emily A. Smith, Joel R. Sevinsky, Russell B. Corbett-Detig, Joseph DeRisi, Joseph DeRisi, Kathleen Jacobson, the COVIDNet Consortium, Summer Adams, Phacharee Arunleung, Matthew Bacinskas, Nikki Baumrind, Elizabeth F. Baylis, Cynthia Bernas, John M. Bell, Ricardo Berumen, Ellen L. Bouchard, Brandon Brown, Teal Bullick, Lyndsey Chaille, Alice Chen, Giorgio Cosentino, Yocelyn Cruz, Nick D’Angelo, Mojgan Deldari, Alex Espinosa, Ambar Espinoza, Eric M. Foote, Shiffen Getabecha, Sabrina Gilliam, Carol A. Glaser, Madeleine Glenn, Bianca Gonzaga, Ydelita Gonzales, Melanie Greengard, Hugo Guevara, Jill K. Hacker, Kim Hansard, April Hatada, Monica Haw, Thalia Huynh, Kathleen Jacobson, Chantha Kath, Paul B. Kimsey, Katya Ledin, Deidra Lemoine, Ruth Lopez, Sharon L. Messenger, Blanca Molinar, Christina Morales, Samantha Munoz, Robert Nakamura, Nichole Osugi, Tasha Padilla, Chao-Yang Pan, Mayuri V. Panditrao, Chris Preas, Will Probert, Alexa Quintana, Maria Uribe-Fuentes, Mayra Ramirez, Clarence Reyes, Estela Saguar, Maria Salas, Ioana Seritan, Brandon Stavig, Hilary Tamnanchit, Serena Ting, Debra A. Wadford, Cindy Wong, Chelsea Wright, Shigeo Yagi, Venice Servellita, Alicia Sotomayor-Gonzalez, Charles Y. Chiu, Isabel Bjork, Joshua Kapp, Anouk van den Bout, Ellen Kephart, Mawadda Alnaeeli, Hau-Ling Poon, Scott Topper, Marzieh Shafii, Sara Sowko, Stephanie Trammell, Erik Wolfsohn, Patrick Ayscue, Amy Kistler, Emily Crawford, Joseph DeRisi, Cristina Tato, Valeria Arboledaz, Eleazar Eskin, Laila M. Sathe, Jacek Skarbinski, Abigail Duque, Jeffrey Schapiro, Ivy Yeung, Rama Ghatti, Zahra Shajani-Yi, Jacob M. Garrigues, Nicole Green, Peera Hemarajata, Carlos Anaya, Donna Ferguson, Beatrix Kapuszinsky, Favian Ramirez, Felipe Sta Agueda, Megan Crumpler, Julia Wolfe, Russell B. Corbett-Detig, David Haussler, Marc Perry, Jakob McBroome, Nhi Duong, Deborah Forester, Anthony Gonzalez, Maria J. Victorio, Anna Liza M. Manlutac, Jeremy Corrigan, Nicholas S. Rhoades, Lina Castro, Godfred Masinde, Harmeet Kaur, Monica Paniagua-Alexander, Katrina G. Erwin, Glen Miller, Frances N. Sidhu, Morris Jones, Sangita Kothari, Christopher Ngo, Brandon Bonin, Daniel Castillo, Rensen Khoshabian, Kristian Andersen, Mark Zeller, Lisa Critchett, Carlos Gonzalez, Iryna V. Goraichuk, Rachel Rees, Frank Ambrosio, Curtis J. Kapsak, Kevin G. Libuit, Michelle R. Scribner, Joel R. Sevinsky, Emily A. Smith, Sage M. Wright, Vanessa B. Cadiz, Denise Lopez, Matthew Rosman, Bryan Bach, Stacia Wyman, Charlotte Acharya, Ryan Davis, Richard Michelmore, Melanie Oakes, Suzanne Sandmeyer, Kathy Borkovich, Clay H. Clark, Holly Clark, Brandon Le, Peter De Hoff, Kristen Jepsen, Rob Knight, Louise C. Laurent, Zack Aralis, Carolina Arias, Varuzhan Balasanyan, Mark Duhon, Xinmin Li, Eric Chow, Nicole Leung, Delsy Martinez, Tyler T. Miyasaki, Ashlee Clow, Jared Hoffman, Thomas Rush

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