Methods for integration of transcriptomic data in genome-scale metabolic models by Min Kyung Kim, Desmond S. Lun

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Statistical modeling of STR capillary electrophoresis signal by Slim Karkar, Lauren E. Alfonse, Catherine M. Grgicak, Desmond S. Lun

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E-Flux2 and SPOT: Validated Methods for Inferring Intracellular Metabolic Flux Distributions from Transcriptomic Data. by Min Kyung Kim, Anatoliy Lane, James J Kelley, Desmond S Lun

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Assessment of transcriptomic constraint-based methods for central carbon flux inference by Siddharth Bhadra-Lobo, Min Kyung Kim, Desmond S. Lun, Rajagopal Subramanyam

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Four model variants within a continuous forensic DNA mixture interpretation framework: Effects on evidential inference and reporting. by Harish Swaminathan, Muhammad O Qureshi, Catherine M Grgicak, Ken Duffy, Desmond S Lun

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Equivalent T cell epitope promiscuity in ecologically diverse human pathogens. by Kirsten E Wiens, Harish Swaminathan, Richard Copin, Desmond S Lun, Joel D Ernst

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Inferring carbon sources from gene expression profiles using metabolic flux models. by Aaron Brandes, Desmond S Lun, Kuhn Ip, Jeremy Zucker, Caroline Colijn, Brian Weiner, James E Galagan

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Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production. by Caroline Colijn, Aaron Brandes, Jeremy Zucker, Desmond S Lun, Brian Weiner, Maha R Farhat, Tan-Yun Cheng, D Branch Moody, Megan Murray, James E Galagan

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<named-content content-type="genus-species">Staphylococcus aureus</named-content> Coordinates Leukocidin Expression and Pathogenesis by Sensing Metabolic Fluxes via RpiRc by Divya Balasubramanian, Elizabeth A. Ohneck, Jessica Chapman, Andy Weiss, Min Kyung Kim, Tamara Reyes-Robles, Judy Zhong, Lindsey N. Shaw, Desmond S. Lun, Beatrix Ueberheide, Bo Shopsin, Victor J. Torres

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<italic toggle="yes">Staphylococcus aureus</italic> Responds to the Central Metabolite Pyruvate To Regulate Virulence by Lamia Harper, Divya Balasubramanian, Elizabeth A. Ohneck, William E. Sause, Jessica Chapman, Bryan Mejia-Sosa, Tenzin Lhakhang, Adriana Heguy, Aristotelis Tsirigos, Beatrix Ueberheide, Jeffrey M. Boyd, Desmond S. Lun, Victor J. Torres

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Joint base-calling of two DNA sequences with factor graphs by Shi, Xiaomeng, Ph. D. Massachusetts Institute of Technology

Other Authors: “…Muriel Médard and Desmond S. Lun.…”
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