Harmonized genome wide typing of tubercle bacilli using a web-based gene-by-gene nomenclature system Dahkki Kohl, T, Harmsen, D, Rothgänger, J, Walker, T, Diel, R, Niemann, S

SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex Dahkki Lipworth, S, Jajou, R, de Neeling, A, Bradley, P, van der Hoek, W, Maphalala, G, Bonnet, M, Sanchez-Padilla, E, Diel, R, Niemann, S, Iqbal, Z, Smith, G, Peto, T, Crook, D, Walker, T, van Soolingen, D

Some synonymous and nonsynonymous gyrA mutations in Mycobacterium tuberculosis lead to systematic false-positive fluoroquinolone resistance results with the Hain GenoType MTBDRsl a... Dahkki Ajileye, A, Alvarez, N, Merker, M, Walker, T, Akter, S, Brown, K, Moradigaravand, D, Schön, T, Andres, S, Schleusener, V, Omar, S, Coll, F, Huang, H, Diel, R, Ismail, N, Parkhill, J, de Jong, B, Peto, T, Crook, D, Niemann, S, Robledo, J, Smith, E, Peacock, S, Köser, C

Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans. Dahkki Comas, I, Comas, I, Coscolla, M, Luo, T, Borrell, S, Holt, K, Kato-Maeda, M, Parkhill, J, Parkhill, J, Malla, B, Berg, S, Thwaites, G, Yeboah-Manu, D, Bothamley, G, Mei, J, Wei, L, Bentley, S, Harris, SR, Niemann, S, Diel, R, Aseffa, A, Gao, Q, Young, D, Gagneux, S

Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis Dahkki Bradley, P, Gordon, N, Walker, T, Dunn, L, Heys, S, Huang, B, Earle, S, Pankhurst, L, Anson, L, De Cesare, M, Piazza, P, Votintseva, A, Golubchik, T, Wilson, D, Wyllie, D, Diel, R, Niemann, S, Feuerriegel, S, Kohl, T, Ismail, N, Omar, S, Smith, E, Buck, D, McVean, G, Walker, A, Peto, T, Crook, D, Iqbal, Z

Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study. Dahkki Walker, T, Kohl, T, Omar, S, Hedge, J, Del Ojo Elias, C, Bradley, P, Iqbal, Z, Feuerriegel, S, Niehaus, K, Wilson, D, Clifton, D, Kapatai, G, Ip, C, Bowden, R, Drobniewski, F, Allix-Béguec, C, Gaudin, C, Parkhill, J, Diel, R, Supply, P, Crook, D, Smith, E, Walker, A, Ismail, N, Niemann, S, Peto, T

Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis Dahkki Bradley, P, Gordon, N, Walker, T, Dunn, L, Heys, S, Huang, B, Earle, S, Pankhurst, L, Anson, L, De Cesare, M, Piazza, P, Votintseva, A, Golubchik, T, Wilson, D, Wyllie, D, Diel, R, Niemann, S, Feuerriegel, S, Kohl, T, Ismail, N, Omar, S, Smith, E, Buck, D, McVean, G, Walker, A, Peto, T, Crook, D, Iqbal, Z