Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom by Durand, Neva C., Robinson, James T., Shamim, Muhammad S., Machol, Ido, Aiden, Erez Lieberman, Lander, Eric Steven, Mesirov, Jill P.

Get full text

Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments by Durand, Neva C., Shamim, Muhammad S., Machol, Ido, Rao, Suhas S.P., Huntley, Miriam H., Aiden, Erez Lieberman, Lander, Eric Steven

Get full text

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds by Dudchenko, Olga, Batra, Sanjit S., Omer, Arina D., Hoeger, Marie, Durand, Neva C., Shamim, Muhammad S., Machol, Ido, Aiden, Aviva Presser, Aiden, Erez Lieberman, Nyquist, Sarah Kate, Lander, Eric Steven

Get full text

Deletion of DXZ4 on the human inactive X chromosome alters higher-order genome architecture by Darrow, Emily M., Huntley, Miriam H., Dudchenko, Olga, Stamenova, Elena K., Durand, Neva C., Sun, Zhuo, Huang, Su-Chen, Sanborn, Adrian L., Machol, Ido, Shamim, Muhammad, Seberg, Andrew P., Chadwick, Brian P., Aiden, Erez Lieberman, Lander, Eric Steven

Get full text

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes by Sanborn, Adrian L., Rao, Suhas S. P., Huang, Su-Chen, Durand, Neva C., Huntley, Miriam H., Jewett, Andrew I., Bochkov, Ivan D., Chinnappan, Dharmaraj, Cutkosky, Ashok, Li, Jian, Geeting, Kristopher P., Gnirke, Andreas, Melnikov, Alexandre, McKenna, Doug, Stamenova, Elena K., Aiden, Erez Lieberman, Lander, Eric Steven

Get full text

Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations by Fulco, Charles P., Nasser, Joseph, Jones, Thouis R., Munson, Glen, Bergman, Drew T., Subramanian, Vidya, Grossman, Sharon Rachel, Anyoha, Rockwell, Doughty, Benjamin R., Patwardhan, Tejal A., Nguyen, Tung Hoang, Kane, Michael A., Perez, Elizabeth M., Durand, Neva C., Lareau, Caleb A., Stamenova, Elena K., Aiden, Erez Lieberman, Lander, Eric Steven, Engreitz, Jesse Michael

Get full text