5′UTR-mediated regulation of Ataxin-1 expression by Rachna Manek, Tiffany Nelson, Elizabeth Tseng, Edgardo Rodriguez-Lebron

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P188: Synchronized long-read genome, methylene, epigenome, and transcriptome for a putative small fiber peripheral polyneuropathy research study by Max Glanz, Nina Gonzaludo, Elizabeth Tseng, Matthew Merritt, Eric Wang

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Long-read sequencing of chicken transcripts and identification of new transcript isoforms. by Sean Thomas, Jason G Underwood, Elizabeth Tseng, Alisha K Holloway, Bench To Basinet CvDC Informatics Subcommittee

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Long read isoform sequencing reveals hidden transcriptional complexity between cattle subspecies by Yan Ren, Elizabeth Tseng, Timothy P. L. Smith, Stefan Hiendleder, John L. Williams, Wai Yee Low

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Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data by Vladimir B. C. de Souza, Ben T. Jordan, Elizabeth Tseng, Elizabeth A. Nelson, Karen K. Hirschi, Gloria Sheynkman, Mark D. Robinson

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The Landscape of SNCA Transcripts Across Synucleinopathies: New Insights From Long Reads Sequencing Analysis by Elizabeth Tseng, William J. Rowell, Omolara-Chinue Glenn, Omolara-Chinue Glenn, Ting Hon, Julio Barrera, Julio Barrera, Steve Kujawa, Ornit Chiba-Falek, Ornit Chiba-Falek

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Alternative splicing and genetic variation of mhc-e: implications for rhesus cytomegalovirus-based vaccines by Hayden Brochu, Ruihan Wang, Tammy Tollison, Chul-Woo Pyo, Alexander Thomas, Elizabeth Tseng, Lynn Law, Louis J. Picker, Michael Gale, Daniel E. Geraghty, Xinxia Peng

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Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing. by Sean P Gordon, Elizabeth Tseng, Asaf Salamov, Jiwei Zhang, Xiandong Meng, Zhiying Zhao, Dongwan Kang, Jason Underwood, Igor V Grigoriev, Melania Figueroa, Jonathan S Schilling, Feng Chen, Zhong Wang

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An anchored chromosome‐scale genome assembly of spinach improves annotation and reveals extensive gene rearrangements in euasterids by Amanda M Hulse‐Kemp, Hamed Bostan, Shiyu Chen, Hamid Ashrafi, Kevin Stoffel, Walter Sanseverino, Linzhou Li, Shifeng Cheng, Michael C. Schatz, Tyler Garvin, Lindsey J. du Toit, Elizabeth Tseng, Jason Chin, Massimo Iorizzo, Allen Van Deynze

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Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia by Liqing Tian, Ying Shao, Stephanie Nance, Jinjun Dang, Beisi Xu, Xiaotu Ma, Yongjin Li, Bensheng Ju, Li Dong, Scott Newman, Xin Zhou, Patrick Schreiner, Elizabeth Tseng, Ting Hon, Meredith Ashby, Chunliang Li, John Easton, Tanja A. Gruber, Jinghui Zhang

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Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing by Szi Kay Leung, Aaron R. Jeffries, Isabel Castanho, Ben T. Jordan, Karen Moore, Jonathan P. Davies, Emma L. Dempster, Nicholas J. Bray, Paul O’Neill, Elizabeth Tseng, Zeshan Ahmed, David A. Collier, Erin D. Jeffery, Shyam Prabhakar, Leonard Schalkwyk, Connor Jops, Michael J. Gandal, Gloria M. Sheynkman, Eilis Hannon, Jonathan Mill

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RNA-seq data science: From raw data to effective interpretation by Dhrithi Deshpande, Karishma Chhugani, Yutong Chang, Aaron Karlsberg, Caitlin Loeffler, Jinyang Zhang, Agata Muszyńska, Agata Muszyńska, Viorel Munteanu, Harry Yang, Jeremy Rotman, Laura Tao, Brunilda Balliu, Elizabeth Tseng, Eleazar Eskin, Eleazar Eskin, Eleazar Eskin, Fangqing Zhao, Fangqing Zhao, Pejman Mohammadi, Paweł P. Łabaj, Paweł P. Łabaj, Serghei Mangul, Serghei Mangul

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Monoallelically expressed noncoding RNAs form nucleolar territories on NOR-containing chromosomes and regulate rRNA expression by Qinyu Hao, Minxue Liu, Swapna Vidhur Daulatabad, Saba Gaffari, You Jin Song, Rajneesh Srivastava, Shivang Bhaskar, Anurupa Moitra, Hazel Mangan, Elizabeth Tseng, Rachel B Gilmore, Susan M Frier, Xin Chen, Chengliang Wang, Sui Huang, Stormy Chamberlain, Hong Jin, Jonas Korlach, Brian McStay, Saurabh Sinha, Sarath Chandra Janga, Supriya G Prasanth, Kannanganattu V Prasanth

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Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle by Wai Yee Low, Rick Tearle, Ruijie Liu, Sergey Koren, Arang Rhie, Derek M. Bickhart, Benjamin D. Rosen, Zev N. Kronenberg, Sarah B. Kingan, Elizabeth Tseng, Françoise Thibaud-Nissen, Fergal J. Martin, Konstantinos Billis, Jay Ghurye, Alex R. Hastie, Joyce Lee, Andy W. C. Pang, Michael P. Heaton, Adam M. Phillippy, Stefan Hiendleder, Timothy P. L. Smith, John L. Williams

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