Segtor: rapid annotation of genomic coordinates and single nucleotide variations using segment trees. by Gabriel Renaud, Pedro Neves, Edson Luiz Folador, Carlos Gil Ferreira, Fabio Passetti

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ExVe: The knowledge base of orthologous proteins identified in fungal extracellular vesicles by Vinícius da Silva Coutinho Parreira, Letícia Graziela Costa Santos, Marcio L. Rodrigues, Fabio Passetti

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snoRNA and piRNA expression levels modified by tobacco use in women with lung adenocarcinoma. by Natasha Andressa Nogueira Jorge, Gabriel Wajnberg, Carlos Gil Ferreira, Benilton de Sa Carvalho, Fabio Passetti

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CD9 predicts ETV6-RUNX1 in childhood B-cell precursor acute lymphoblastic leukemia by Caroline B. Blunck, Eugênia Terra-Granado, Elda P. Noronha, Gabriel Wajnberg, Fábio Passetti, Maria S. Pombo-de-Oliveira, Mariana Emerenciano

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Selecting Genetic Variants and Interactions Associated with Amyotrophic Lateral Sclerosis: A Group LASSO Approach by Sofia Galvão Feronato, Maria Luiza Matos Silva, Rafael Izbicki, Ticiana D. J. Farias, Patrícia Shigunov, Bruno Dallagiovanna, Fabio Passetti, Hellen Geremias dos Santos

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Dysregulation of Transcription Factor Networks Unveils Different Pathways in Human Papillomavirus 16-Positive Squamous Cell Carcinoma and Adenocarcinoma of the Uterine Cervix by Saloe Bispo, Ticiana D. J. Farias, Patricia Savio de Araujo-Souza, Patricia Savio de Araujo-Souza, Ricardo Cintra, Hellen Geremias dos Santos, Natasha Andressa Nogueira Jorge, Natasha Andressa Nogueira Jorge, Mauro Antônio Alves Castro, Gabriel Wajnberg, Gabriel Wajnberg, Nicole de Miranda Scherer, Maria Luiza Nogueira Dias Genta, Jesus Paula Carvalho, Luisa Lina Villa, Luisa Lina Villa, Laura Sichero, Fabio Passetti, Fabio Passetti

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Identification of Novel Genes and Proteoforms in <i>Angiostrongylus costaricensis</i> through a Proteogenomic Approach by Esdras Matheus Gomes da Silva, Karina Mastropasqua Rebello, Young-Jun Choi, Vitor Gregorio, Alexandre Rossi Paschoal, Makedonka Mitreva, James H. McKerrow, Ana Gisele da Costa Neves-Ferreira, Fabio Passetti

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SpliceProt 2.0: A Sequence Repository of Human, Mouse, and Rat Proteoforms by Letícia Graziela Costa Santos, Vinícius da Silva Coutinho Parreira, Esdras Matheus Gomes da Silva, Marlon Dias Mariano Santos, Alexander da Franca Fernandes, Ana Gisele da Costa Neves-Ferreira, Paulo Costa Carvalho, Flávia Cristina de Paula Freitas, Fabio Passetti

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Proteomic Analysis of a Rat Streptozotocin Model Shows Dysregulated Biological Pathways Implicated in Alzheimer’s Disease by Esdras Matheus Gomes da Silva, Juliana S. G. Fischer, Isadora de Lourdes Signorini Souza, Amanda Caroline Camillo Andrade, Leonardo de Castro e Souza, Marcos Kaoann de Andrade, Paulo C. Carvalho, Ricardo Lehtonen Rodrigues Souza, Maria Aparecida Barbato Frazao Vital, Fabio Passetti

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Next Generation of Ovarian Cancer Detection Using Aptamers by Rayane da Silva Abreu, Deborah Antunes, Aline dos Santos Moreira, Fabio Passetti, Julia Badaró Mendonça, Natássia Silva de Araújo, Tayanne Felippe Sassaro, Anael Viana Pinto Alberto, Nina Carrossini, Priscila Valverde Fernandes, Mayla Abrahim Costa, Ana Carolina Ramos Guimarães, Wim Maurits Sylvain Degrave, Mariana Caldas Waghabi

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Proteogenomics Reveals Orthologous Alternatively Spliced Proteoforms in the Same Human and Mouse Brain Regions with Differential Abundance in an Alzheimer’s Disease Mouse Model by Esdras Matheus Gomes da Silva, Letícia Graziela Costa Santos, Flávia Santiago de Oliveira, Flávia Cristina de Paula Freitas, Vinícius da Silva Coutinho Parreira, Hellen Geremias dos Santos, Raphael Tavares, Paulo Costa Carvalho, Ana Gisele da Costa Neves-Ferreira, Andrea Siqueira Haibara, Patrícia Savio de Araujo-Souza, Adriana Abalen Martins Dias, Fabio Passetti

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Re-emergence of Gamma-like-II and emergence of Gamma-S:E661D SARS-CoV-2 lineages in the south of Brazil after the 2021 outbreak by Mauro M. Oliveira, Michelle O. Schemberger, Andreia A. Suzukawa, Irina N. Riediger, Maria do Carmo Debur, Guilherme Becker, Paola Cristina Resende, Tiago Gräf, Eduardo Balsanelli, Valter Antônio de Baura, Emanuel M. de Souza, Fábio O. Pedrosa, Lysangela R. Alves, Lucas Blanes, Sheila Cristina Nardelli, Alessandra M. Aguiar, Letusa Albrecht, Dalila Zanette, Andréa R. Ávila, Luis Gustavo Morello, Fabricio K. Marchini, Hellen G. dos Santos, Fabio Passetti, Bruno Dallagiovanna, Helisson Faoro

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Rare genetic variants involved in multisystem inflammatory syndrome in children: a multicenter Brazilian cohort study by Bárbara Carvalho Santos Dos Reis, Bárbara Carvalho Santos Dos Reis, Bárbara Carvalho Santos Dos Reis, Roberta Soares Faccion, Roberta Soares Faccion, Flavia Amendola Anisio de Carvalho, Flavia Amendola Anisio de Carvalho, Daniella Campelo Batalha Cox Moore, Daniella Campelo Batalha Cox Moore, Maria Celia Chaves Zuma, Maria Celia Chaves Zuma, Desirée Rodrigues Plaça, Desirée Rodrigues Plaça, Igor Salerno Filgueiras, Dennyson Leandro Mathias Fonseca, Otavio Cabral-Marques, Otavio Cabral-Marques, Otavio Cabral-Marques, Otavio Cabral-Marques, Otavio Cabral-Marques, Otavio Cabral-Marques, Adriana Cesar Bonomo, Adriana Cesar Bonomo, Adriana Cesar Bonomo, Adriana Cesar Bonomo, Wilson Savino, Wilson Savino, Wilson Savino, Wilson Savino, Flávia Cristina de Paula Freitas, Helisson Faoro, Fabio Passetti, Jaqueline Rodrigues Robaina, Felipe Rezende Caino de Oliveira, Ana Paula Novaes Bellinat, Raquel de Seixas Zeitel, Margarida dos Santos Salú, Margarida dos Santos Salú, Margarida dos Santos Salú, Mariana Barros Genuíno de Oliveira, Gustavo Rodrigues-Santos, Arnaldo Prata-Barbosa, Arnaldo Prata-Barbosa, Zilton Farias Meira de Vasconcelos

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