Genomic epidemiology quantifies gaps in Aedes-borne virus transmission in the Americas by da Silva Cândido, D, Pybus, OG, Faria, NR

Altered demographic profile of hospitalizations during the second COVID-19 wave in Amazonas, Brazil by Whittaker, C, Ratmann, O, Dye, CM, Sabino, EC, Faria, NR

How war and risky sexual behaviours shape the Ukrainian HIV epidemic: A phylogeographic analysis by Vasylyeva, TI, Liulchuk, M, Friedman, SR, Sazonova, I, Faria, NR, Katzourakis, A, Babii, N, Scherbinska, A, Pybus, OG, Smyrnov, P, Mbisa, T, Paraskevis, D, Faria, NR, Magiorkinis, G

Reconstruction and prediction of viral disease epidemics by Kraemer, MUG, Cummings, DAT, Funk, S, Reiner, RC, Faria, NR, Pybus, OG, Cauchemez, S

Routes for COVID-19 importation in Brazil by Candido, DDS, Watts, A, Abade, L, Kraemer, MUG, Pybus, OG, Croda, J, Oliveira, W, Khan, K, Sabino, EC, Faria, NR

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil by Faria, NR, Mellan, TA, Whittaker, C, da S Candido, D, Hulswit, RJG, Kraemer, MUG, Schnekenberg, RP, Bowden, TA, Dye, C, Pybus, OG

Scale-free dynamics of COVID-19 in a Brazilian city by Policarpo, JMP, Ramos, AAGF, Dye, C, Faria, NR, Leal, FE, Moraes, OJS, Parag, KV, Peixoto, PS, Buss, L, Sabino, EC, Nascimento, VH, Deppman, A

Tracing the impact of public health interventions on HIV-1 transmission in Portugal using molecular epidemiology by Vasylyeva, TI, Du Plessis, L, Pineda-Peña, AC, Kühnert, D, Lemey, P, Vandamme, A-M, Gomes, P, Camacho, RJ, Pybus, OG, Abecasis, AB, Faria, NR

Tracking the emergence of disparities in the subnational spread of COVID-19 in Brazil using an online application for real-time data visualisation: a longitudinal analysis by Mee, P, Alexander, N, Mayaud, P, González, FDJC, Abbott, S, De Souza Santos, AA, Acosta, AL, Parag, KV, Pereira, RHM, Prete, CA, Sabino, EC, Faria, NR, Brady, OJ

Antibody seroconversion in asymptomatic andsymptomatic patients infected with severe acuterespiratory syndrome coronavirus 2 (SARS-CoV-2) by Jiang, C, Wang, Y, Hu, M, Wen, L, Wen, C, Wang, Y, Zhu, W, Tai, S, Jiang, Z, Xiao, K, Faria, NR, De Clercq, E, Xu, J, Li, G

Utilizing general human movement models to predict the spread of emerging infectious diseases in resource poor settings by Kraemer, MUG, Golding, N, Bisanzio, D, Bhatt, S, Pigott, DM, Ray, SE, Brady, OJ, Brownstein, JS, Faria, NR, Cummings, DAT, Pybus, OG, Smith, DL, Tatem, AJ, Hay, SI, Reiner, RCJ

Serial interval distribution of SARS-CoV-2 infection in Brazil by Prete Jr, CA, Buss, L, Dighe, A, Porto, VB, da Silva Candido, DA, Ghilardi, F, Pybus, OG, de Oliveira, WK, Croda, JHR, Sabino, EC, Faria, NR, Donnelly, CA, Nascimento, VH

Dynamics of SARS-CoV-2 infection over two epidemic waves in Manaus, Brazil: A serological study of seven thousand blood donors by Alexander, N, Dye, C, Busch, MP, Buss, L, Prete, CA, Brady, OJ, Mee, P, Abrahim, CMM, Crispim, MAE, da Costa, AG, Salomon, T, Mayaud, P, Oikawa, MK, Faria, NR, Sabino, EC

Mortality risk of COVID-19 in elderly males with comorbidities: a multi-country study by Li, G, Liu, Y, Jing, X, Wang, Y, Miao, M, Tao, L, Zhou, Z, Xie, Y, Huang, Y, Lei, J, Gong, G, Jin, P, Hao, Y, Faria, NR, Clercq, ED, Zhang, M

Genomic surveillance of Zika virus transmission in the Amazonas State, Brazil by Giovanetti, M, de Jesus, JG, Joshua, Q, Claro, IM, Xavier Junior, J, Hill, SC, Renato, S, Paz, P, Lourenço, J, Dellicour, S, Sabino, E, Loman, NJ, Naveca, F, Pybus, OG, Faria, NR, Junior Alcantara, LC

SARS-CoV-2 reinfection caused by the P.1 lineage in Araraquara city, Sao Paulo State, Brazil by Romano, CM, Felix, AC, Paula, AVD, Jesus, JGD, Andrade, PS, Cândido, D, Oliveira, FMD, Ribeiro, AC, Silva, FCD, Inemami, M, Costa, AA, Leal, COD, Figueiredo, WM, Pannuti, CS, Souza, WMD, Faria, NR, Sabino, EC

Epidemiology and evolution of Zika virus in Minas Gerais, Southeast Brazil by Iani, FCM, Giovanetti, M, Fonseca, V, Souza, WM, Adelino, TER, Xavier, J, Jesus, JG, Pereira, MA, Silva, MVF, Costa, AVB, Silva, EC, Mendes, MCO, Filippis, AMB, Albuquerque, CFC, Abreu, AL, Oliveira, MAA, Alcantara, LCJ, Faria, NR

Reinfection by the SARS-CoV-2 Gamma variant in blood donors in Manaus, Brazil by Prete, CA, Buss, LF, Buccheri, R, Abrahim, CMM, Salomon, T, Crispim, MAE, Oikawa, MK, Grebe, E, da Costa, AG, Fraiji, NA, do P. S. S. Carvalho, M, Whittaker, C, Alexander, N, Faria, NR, Dye, CM, Nascimento, VH, Busch, MP, Sabino, EC

A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages by Dellicour, S, Durkin, K, Hong, SL, Vanmechelen, B, Martí-Carreras, J, Gill, MS, Meex, C, Bontems, S, André, E, Gilbert, M, Walker, C, De Maio, N, Faria, NR, Hadfield, J, Hayette, M-P, Bours, V, Wawina-Bokalanga, T, Artesi, M, Baele, G, Maes, P

The effect of human mobility and control measures on the COVID-19 epidemic in China by Kraemer, MUG, Yang, C-H, Gutierrez, B, Wu, C-H, Klein, B, Pigott, DM, Open COVID-19 Data Working Group, du Plessis, L, Faria, NR, Li, R, Hanage, WP, Brownstein, JS, Layan, M, Vespignani, A, Tian, H, Dye, C, Pybus, OG, Scarpino, SV