Genome-Wide Epigenetic Studies in Chicken: A Review by Sarah-Anne David, Marjorie Mersch, Sylvain Foissac, Anne Collin, Frédérique Pitel, Vincent Coustham

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Apports du séquençage haut-débit sur la connaissance de l'épigénome aviaire by Marjorie MERSCH, Sarah-Anne DAVID, Anaïs VITORINO CARVALHO, Sylvain FOISSAC, Anne COLLIN, Frédérique PITEL, Vincent COUSTHAM

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Rôle de l'environnement précoce dans la variabilité des phénotypes et l’adaptation des animaux d’élevage à leur milieu by Frédérique PITEL, Fanny CALENGE, Nadège AIGUEPERSE, Jordi ESTELLÉ-FABRELLAS, Vincent COUSTHAM, Ludovic CALANDREAU, Mireille MORISSON, Pascale CHAVATTE-PALMER, Cécile GINANE

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Thermal conditioning of quail embryos has transgenerational and reversible long-term effects by Anaïs Vitorino Carvalho, Christelle Hennequet-Antier, Romuald Rouger, Joël Delaveau, Thierry Bordeau, Sabine Crochet, Nathalie Couroussé, Frederique Pitel, Anne Collin, Vincent Coustham

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Watch Out for a Second SNP: Focus on Multi-Nucleotide Variants in Coding Regions and Rescued Stop-Gained by Fabien Degalez, Frédéric Jehl, Kévin Muret, Maria Bernard, Maria Bernard, Frédéric Lecerf, Laetitia Lagoutte, Colette Désert, Frédérique Pitel, Christophe Klopp, Sandrine Lagarrigue

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Two new structural mutations in the 5′ region of the ASIP gene cause diluted feather color phenotypes in Japanese quail by Annie Robic, Mireille Morisson, Sophie Leroux, David Gourichon, Alain Vignal, Noémie Thebault, Valérie Fillon, Francis Minvielle, Bertrand Bed’Hom, Tatiana Zerjal, Frédérique Pitel

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Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates. by Laure Frésard, Sophie Leroux, Pierre-François Roux, Christophe Klopp, Stéphane Fabre, Diane Esquerré, Patrice Dehais, Anis Djari, David Gourichon, Sandrine Lagarrigue, Frédérique Pitel

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Mapping of leptin and its syntenic genes to chicken chromosome 1p by Eyal Seroussi, Frédérique Pitel, Sophie Leroux, Mireille Morisson, Susanne Bornelöv, Shoval Miyara, Sara Yosefi, Larry A. Cogburn, David W. Burt, Leif Anderson, Miriam Friedman-Einat

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Correction to: Mapping of leptin and its syntenic genes to chicken chromosome 1p by Eyal Seroussi, Frédérique Pitel, Sophie Leroux, Mireille Morisson, Susanne Bornelöv, Shoval Miyara, Sara Yosefi, Larry A. Cogburn, David W. Burt, Leif Andersson, Miriam Friedman-Einat

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The Extent of mRNA Editing Is Limited in Chicken Liver and Adipose, but Impacted by Tissular Context, Genotype, Age, and Feeding as Exemplified with a Conserved Edited Site in COG3 by Pierre-François Roux, Laure Frésard, Morgane Boutin, Sophie Leroux, Christophe Klopp, Anis Djari, Diane Esquerré, Pascal GP Martin, Tatiana Zerjal, David Gourichon, Frédérique Pitel, Sandrine Lagarrigue

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Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues by Fabien Degalez, Mathieu Charles, Sylvain Foissac, Haijuan Zhou, Dailu Guan, Lingzhao Fang, Christophe Klopp, Coralie Allain, Laetitia Lagoutte, Frédéric Lecerf, Hervé Acloque, Elisabetta Giuffra, Frédérique Pitel, Sandrine Lagarrigue

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Cryptic patterning of avian skin confers a developmental facility for loss of neck feathering. by Chunyan Mou, Frederique Pitel, David Gourichon, Florence Vignoles, Athanasia Tzika, Patricia Tato, Le Yu, Dave W Burt, Bertrand Bed'hom, Michele Tixier-Boichard, Kevin J Painter, Denis J Headon

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Detection of a Cis [corrected] eQTL controlling BCMO1 gene expression leads to the identification of a QTG for chicken breast meat color. by Elisabeth Le Bihan-Duval, Javad Nadaf, Cécile Berri, Frédérique Pitel, Benoît Graulet, Estelle Godet, Sophie Y Leroux, Olivier Demeure, Sandrine Lagarrigue, Cécile Duby, Larry A Cogburn, Catherine M Beaumont, Michel J Duclos

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Correction: Detection of a Cis eQTL Controlling Gene Expression Leads to the Identification of a QTG for Chicken Breast Meat Color. by Elisabeth Le Bihan-Duval, Javad Nadaf, Cécile Berri, Frédérique Pitel, Benoît Graulet, Estelle Godet, Sophie Y. Leroux, Olivier Demeure, Sandrine Lagarrigue, Cécile Duby, Larry A. Cogburn, Catherine M. Beaumont, Michel J. Duclos

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Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues by Frédéric Jehl, Kévin Muret, Maria Bernard, Morgane Boutin, Laetitia Lagoutte, Colette Désert, Patrice Dehais, Diane Esquerré, Hervé Acloque, Elisabetta Giuffra, Sarah Djebali, Sylvain Foissac, Thomas Derrien, Frédérique Pitel, Tatiana Zerjal, Christophe Klopp, Sandrine Lagarrigue

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An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues by Frédéric Jehl, Kévin Muret, Maria Bernard, Morgane Boutin, Laetitia Lagoutte, Colette Désert, Patrice Dehais, Diane Esquerré, Hervé Acloque, Elisabetta Giuffra, Sarah Djebali, Sylvain Foissac, Thomas Derrien, Frédérique Pitel, Tatiana Zerjal, Christophe Klopp, Sandrine Lagarrigue

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Epigénétique, gènes et environnement : quelle importance pour les pratiques d’élevage et les méthodes de sélection des volailles ? by Vincent COUSTHAM, Charlotte ANDRIEUX, Chloé CERUTTI, Anne COLLIN, Ingrid DAVID, Julie DEMARS, Guillaume DEVAILLY, Mireille MORISSON, Marianne HOUSSIER, Sandrine LAGARRIGUE, Sonia MÉTAYER-COUSTARD, Sandrine MIGNON-GRASTEAU, Stéphane PANSERAT, Angélique PETIT, Anaïs VITORINO CARVALHO, Tatiana ZERJAL, Frédérique PITEL

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RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and Cis-Regulation Analysis by Allele-Specific Expression in Livestock Sp... by Frédéric Jehl, Fabien Degalez, Maria Bernard, Maria Bernard, Frédéric Lecerf, Laetitia Lagoutte, Colette Désert, Manon Coulée, Olivier Bouchez, Sophie Leroux, Behnam Abasht, Michèle Tixier-Boichard, Bertrand Bed’hom, Thierry Burlot, David Gourichon, Philippe Bardou, Hervé Acloque, Sylvain Foissac, Sarah Djebali, Elisabetta Giuffra, Tatiana Zerjal, Frédérique Pitel, Christophe Klopp, Sandrine Lagarrigue

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The quail genome: insights into social behaviour, seasonal biology and infectious disease response by Katrina M. Morris, Matthew M. Hindle, Simon Boitard, David W. Burt, Angela F. Danner, Lel Eory, Heather L. Forrest, David Gourichon, Jerome Gros, LaDeana W. Hillier, Thierry Jaffredo, Hanane Khoury, Rusty Lansford, Christine Leterrier, Andrew Loudon, Andrew S. Mason, Simone L. Meddle, Francis Minvielle, Patrick Minx, Frédérique Pitel, J. Patrick Seiler, Tsuyoshi Shimmura, Chad Tomlinson, Alain Vignal, Robert G. Webster, Takashi Yoshimura, Wesley C. Warren, Jacqueline Smith

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