Dynamics of MDR Enterobacter cloacae outbreaks in a neonatal unit in Nepal: insights using wider sampling frames and next-generation sequencing. by Stoesser, N, Sheppard, A, Shakya, M, Sthapit, B, Thorson, S, Giess, A, Kelly, D, Pollard, A, Peto, T, Walker, A, Crook, D

Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing. by Mathers, A, Stoesser, N, Sheppard, A, Pankhurst, L, Giess, A, Yeh, A, Didelot, X, Turner, S, Sebra, R, Kasarskis, A, Peto, T, Crook, D, Sifri, C

Extensive within-host diversity in fecally carried extended-spectrum-beta-lactamase-producing Escherichia coli isolates: implications for transmission analyses by Stoesser, N, Sheppard, AE, Moore, CE, Golubchik, T, Parry, CM, Nget, P, Saroeun, M, Day, NPJ, Giess, A, Johnson, JR, Peto, TEA, Crook, DW, Walker, AS

Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses. by Stoesser, N, Sheppard, A, Moore, C, Golubchik, T, Parry, C, Nget, P, Saroeun, M, Day, N, Giess, A, Johnson, JR, Peto, T, Crook, D, Walker, A

Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia by Van Aartsen, J, Moore, C, Parry, C, Turner, P, Phot, N, Mao, S, Suy, K, Davies, T, Giess, A, Sheppard, A, Peto, T, Day, N, Crook, D, Walker, A, Stoesser, N

Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England by Wong, T, Dearlove, B, Hedge, J, Giess, A, Piazza, P, Trebes, A, Paul, J, Smit, E, Smith, E, Sutton, J, Wilcox, M, Dingle, K, Peto, T, Crook, D, Wilson, D, Wyllie, D

Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England. by Wong, T, Dearlove, B, Hedge, J, Giess, A, Piazza, P, Trebes, A, Paul, J, Smit, E, Smith, E, Sutton, J, Wilcox, M, Dingle, K, Peto, T, Crook, D, Wilson, D, Wyllie, D

Nested Russian doll-like genetic mobility drives rapid dissemination of the carbapenem resistance gene blaKPC by Sheppard, A, Stoesser, N, Wilson, D, Sebra, R, Kasarkis, A, Anson, L, Giess, A, Pankhurst, L, Vaughan, A, Grim, C, Cox, H, Yeh, A, Sifri, C, Walker, A, Peto, T, Crook, D, Mathers, A

Genome sequencing of an extended series of NDM-producing Klebsiella pneumoniae isolates from neonatal infections in a Nepali hospital characterizes the extent of community- versus... by Stoesser, N, Giess, A, Batty, E, Sheppard, A, Walker, A, Wilson, D, Didelot, X, Bashir, A, Sebra, R, Kasarskis, A, Sthapit, B, Shakya, M, Kelly, D, Pollard, A, Peto, T, Crook, D, Donnelly, P, Thorson, S, Amatya, P, Joshi, S

Assessment of Mycobacterium tuberculosis transmission in Oxfordshire, UK, 2007-12, with whole pathogen genome sequences: An observational study by Walker, T, Golubchik, T, Giess, A, Del Ojo Elias, C, Walker, A, Crook, D, Peto, T, Conlon, C, Morgan, M, Jeffery, K, Bowler, I, Lalor, M, Anderson, L, Abubakar, I, Thomas, H, Broda, A, Drobniewski, F, Ortega, L, McCarthy, N, Parker, L, Churchill, S, Bennett, K, Laurenson, I, Barrett, A, Monk, P

Assessment of Mycobacterium tuberculosis transmission in Oxfordshire, UK, 2007-12, with whole pathogen genome sequences: an observational study. by Walker, T, Lalor, M, Broda, A, Saldana Ortega, L, Morgan, M, Parker, L, Churchill, S, Bennett, K, Golubchik, T, Giess, A, Del Ojo Elias, C, Jeffery, K, Bowler, I, Laurenson, I, Barrett, A, Drobniewski, F, McCarthy, N, Anderson, L, Abubakar, I, Thomas, H, Monk, P, Smith, E, Walker, A, Crook, D, Peto, T, Conlon, C

Maternal colonization with Streptococcus agalactiae and associated stillbirth and neonatal disease in coastal Kenya. by Seale, A, Koech, A, Sheppard, A, Barsosio, H, Langat, J, Anyango, E, Mwakio, S, Mwarumba, S, Morpeth, S, Anampiu, K, Vaughan, A, Giess, A, Mogeni, P, Walusuna, L, Mwangudzah, H, Mwanzui, D, Salim, M, Kemp, B, Jones, C, Mturi, N, Tsofa, B, Mumbo, E, Mulewa, D, Bandika, V, Soita, M, Owiti, M, Onzere, N, Walker, A, Schrag, S, Kennedy, S, Fegan, G, Crook, D, Berkley, J

Maternal colonisation with Streptococcus agalactiae, and associated stillbirth and neonatal disease in coastal Kenya by Berkley, J, Seale, A, Koech, A, Sheppard, A, Barsosio, H, Langat, J, Anyango, E, Mwarumba, S, Makio, S, Morpeth, S, Anampiu, K, Vaughan, A, Giess, A, Mogeni, P, Walusuna, L, Mwangudzah, H, Mwanzui, D, Salim, M, Kemp, B, Jones, C, Mturi, N, Tsofa, B, Mumbo, E, Mulewa, D, Bandika, V, Soita, M, Owiti, M, Onzere, N, Walker, A, Schrag, S, Kennedy, S, Fegan, G, Crook, D

Biallelic TMEM260 variants cause Truncus Arteriosus, with or without renal defects by Pagnamenta, AT, Jackson, A, Perveen, R, Beaman, G, Petts, G, Gupta, A, Hyder, Z, Chung, BH, Kan, AS, Cheung, KW, Kerstjens‐Frederikse, WS, Abbott, KM, Ambrose, JC, Arumugam, P, Bevers, R, Bleda, M, Boardman‐Pretty, F, Boustred, CR, Brittain, H, Caulfield, MJ, Chan, GC, Elgar, G, Fowler, T, Giess, A, Hamblin, A, Henderson, S, Hubbard, TJP, Jackson, R, Jones, LJ, Kasperaviciute, D, Kayikci, M, Kousathanas, A, Lahnstein, L, Leigh, SEA, Leong, IUS, Lopez, JF, Maleady‐Crowe, F, McEntagart, M, Minneci, F, Moutsianas, L, Mueller, M, Murugaesu, N, Need, AC, O′Donovan, P, Odhams, CA, Patch, C, Pereira, MB, Perez‐Gil, D, Pullinger, J, Rahim, T