MIRU-profiler: a rapid tool for determination of 24-loci MIRU-VNTR profiles from assembled genomes of Mycobacterium tuberculosis by Rahim Rajwani, Sheeba Shehzad, Gilman Kit Hang Siu

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Understanding spatiotemporal symptom onset risk of Omicron BA.1, BA.2 and hamster-related Delta AY.127 by Chengzhuo Tong, Wenzhong Shi, Gilman Kit-Hang Siu, Anshu Zhang, Zhicheng Shi

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Biofilm-Induced Antibiotic Resistance in Clinical <i>Acinetobacter baumannii</i> Isolates by Abebe Mekuria Shenkutie, Mian Zhi Yao, Gilman Kit-hang Siu, Barry Kin Chung Wong, Polly Hang-mei Leung

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Comparative Whole-Genomic Analysis of an Ancient L2 Lineage Mycobacterium tuberculosis Reveals a Novel Phylogenetic Clade and Common Genetic Determinants of Hypervirulent Strains by Rahim Rajwani, Wing Cheong Yam, Ying Zhang, Yu Kang, Barry Kin Chung Wong, Kenneth Siu Sing Leung, Kingsley King Gee Tam, Ketema Tafess Tulu, Li Zhu, Gilman Kit Hang Siu

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Induction of amphotericin B resistance in susceptible Candida auris by extracellular vesicles by Walton Chan, Franklin Wang-Ngai Chow, Chi-Ching Tsang, Xueyan Liu, Weiming Yao, Tony Tat-Yin Chan, Gilman Kit-Hang Siu, Alex Yat-Man Ho, Kristine Shik Luk, Susanna Kar-Pui Lau, Patrick Chiu-Yat Woo

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Viral MicroRNAs Encoded by Nucleocapsid Gene of SARS-CoV-2 Are Detected during Infection, and Targeting Metabolic Pathways in Host Cells by Fei Meng, Gilman Kit-Hang Siu, Bobo Wing-Yee Mok, Jiahong Sun, Kitty S. C. Fung, Jimmy Yiu-Wing Lam, Nonthaphat Kent Wong, Lealem Gedefaw, Shumeng Luo, Thomas M. H. Lee, Shea Ping Yip, Chien-Ling Huang

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Clinical utility of target amplicon sequencing test for rapid diagnosis of drug-resistant Mycobacterium tuberculosis from respiratory specimens by Kenneth Siu-Sing Leung, Kingsley King-Gee Tam, Timothy Ting-Leung Ng, Hiu-Yin Lao, Raymond Chiu-Man Shek, Oliver Chiu Kit Ma, Shi-Hui Yu, Jing-Xian Chen, Qi Han, Gilman Kit-Hang Siu, Wing-Cheong Yam

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An AI-empowered indoor digital contact tracing system for COVID-19 outbreaks in residential care homes by Jiahui Meng, Justina Yat Wa Liu, Lin Yang, Man Sing Wong, Hilda Tsang, Boyu Yu, Jincheng Yu, Freddy Man-Hin Lam, Daihai He, Lei Yang, Yan Li, Gilman Kit-Hang Siu, Stefanos Tyrovolas, Yao Jie Xie, David Man, David H.K. Shum

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Genetic mechanisms of co-emergence of INH-resistant Mycobacterium tuberculosis strains during the standard course of antituberculosis therapy by Ketema Tafess, Timothy Ting-Leung Ng, Kingsley King-Gee Tam, Kenneth Siu-Sing Leung, Jake Siu-Lun Leung, Lam-Kwong Lee, Hiu Yin Lao, Chloe Toi-Mei Chan, Wing-Cheong Yam, Samson Sai Yin Wong, Terrence Chi-Kwong Lau, Gilman Kit-Hang Siu

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Screening Repurposed Antiviral Small Molecules as Antimycobacterial Compounds by a Lux-Based phoP Promoter-Reporter Platform by Li Zhu, Annie Wing-Tung Lee, Kelvin Ka-Lok Wu, Peng Gao, Kingsley King-Gee Tam, Rahim Rajwani, Galata Chala Chaburte, Timothy Ting-Leung Ng, Chloe Toi-Mei Chan, Hiu Yin Lao, Wing Cheong Yam, Richard Yi-Tsun Kao, Gilman Kit Hang Siu

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Spatiotemporal Distribution of Tuberculosis in the Oromia Region of Ethiopia: A Hotspot Analysis by Dereje Bekele, Solomon Aragie, Kefyalew Addis Alene, Tariku Dejene, Samson Warkaye, Melat Mezemir, Dereje Abdena, Tesfaye Kebebew, Abera Botore, Geremew Mekonen, Gadissa Gutema, Boja Dufera, Kolato Gemede, Birhanu Kenate, Dabesa Gobena, Bizuneh Alemu, Dagnachew Hailemariam, Daba Muleta, Gilman Kit Hang Siu, Ketema Tafess

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Identification of microbial community in the urban environment: The concordance between conventional culture and nanopore 16S rRNA sequencing by Annie Wing-Tung Lee, Chloe Toi-Mei Chan, Lily Lok-Yee Wong, Cheuk-Yi Yip, Wing-Tung Lui, Kai-Chun Cheng, Jake Siu-Lun Leung, Lam-Kwong Lee, Ivan Tak-Fai Wong, Timothy Ting-Leung Ng, Hiu-Yin Lao, Gilman Kit-Hang Siu

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Evaluation of Mycobacterium tuberculosis enrichment in metagenomic samples using ONT adaptive sequencing and amplicon sequencing for identification and variant calling by Junhao Su, Wui Wang Lui, YanLam Lee, Zhenxian Zheng, Gilman Kit-Hang Siu, Timothy Ting-Leung Ng, Tong Zhang, Tommy Tsan-Yuk Lam, Hiu-Yin Lao, Wing-Cheong Yam, Kingsley King-Gee Tam, Kenneth Siu-Sing Leung, Tak-Wah Lam, Amy Wing-Sze Leung, Ruibang Luo

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A multi-omics investigation into the mechanisms of hyper-virulence in Mycobacterium tuberculosis by Rahim Rajwani, Chala Galata, Annie Wing Tung Lee, Pui-Kin So, Kenneth Siu Sing Leung, Kingsley King Gee Tam, Sheeba Shehzad, Timothy Ting Leung Ng, Li Zhu, Hiu Yin Lao, Chloe Toi-Mei Chan, Jake Siu-Lun Leung, Lam-Kwong Lee, Kin Chung Wong, Wing Cheong Yam, Gilman Kit-Hang Siu

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Low dose inocula of SARS-CoV-2 Alpha variant transmits more efficiently than earlier variants in hamsters by Bobo Wing-Yee Mok, Honglian Liu, Shaofeng Deng, Jiayan Liu, Anna Jinxia Zhang, Siu-Ying Lau, Siwen Liu, Rachel Chun-Yee Tam, Conor J. Cremin, Timothy Ting-Leung Ng, Jake Siu-Lun Leung, Lam-Kwong Lee, Pui Wang, Kelvin Kai-Wang To, Jasper Fuk-Woo Chan, Kwok-Hung Chan, Kwok-Yung Yuen, Gilman Kit-Hang Siu, Honglin Chen

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The clinical utility of Nanopore 16S rRNA gene sequencing for direct bacterial identification in normally sterile body fluids by Hiu-Yin Lao, Lily Lok-Yee Wong, Yan Hui, Timothy Ting-Leung Ng, Chloe Toi-Mei Chan, Hazel Wing-Hei Lo, Miranda Chong-Yee Yau, Eddie Chi-Man Leung, River Chun-Wai Wong, Alex Yat-Man Ho, Kam-Tong Yip, Jimmy Yiu-Wing Lam, Viola Chi-Ying Chow, Kristine Shik Luk, Tak-Lun Que, Franklin Wang Ngai Chow, Gilman Kit-Hang Siu

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Complementation of contact tracing by mass testing for successful containment of beta COVID-19 variant (SARS-CoV-2 VOC B.1.351) epidemic in Hong Kong by Vincent Chi-Chung Cheng, Gilman Kit-Hang Siu, Shuk-Ching Wong, Albert Ka-Wing Au, Cecilia Suk-Fun Ng, Hong Chen, Xin Li, Lam-Kwong Lee, Jake Siu-Lun Leung, Kelvin Keru Lu, Hazel Wing-Hei Lo, Evelyn Yin-Kwan Wong, Shik Luk, Bosco Hoi-Shiu Lam, Wing-Kin To, Rodney Allan Lee, David Christopher Lung, Mike Yat-Wah Kwan, Herman Tse, Shuk-Kwan Chuang, Kelvin Kai-Wang To, Kwok-Yung Yuen

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Will a new clade of SARS-CoV-2 imported into the community spark a fourth wave of the COVID-19 outbreak in Hong Kong? by Gilman Kit-Hang Siu, Lam-Kwong Lee, Kenneth Siu-Sing Leung, Jake Siu-Lun Leung, Timothy Ting-Leung Ng, Chloe Toi-Mei Chan, Kingsley King-Gee Tam, Hiu-Yin Lao, Alan Ka-Lun Wu, Miranda Chong-Yee Yau, Yvette Wai-Man Lai, Kitty Sau-Chun Fung, Sandy Ka-Yee Chau, Barry Kin-Chung Wong, Wing-Kin To, Kristine Luk, Alex Yat-Man Ho, Tak-Lun Que, Kam-Tong Yip, Wing Cheong Yam, David Ho-Keung Shum, Shea Ping Yip

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The impact of spike N501Y mutation on neutralizing activity and RBD binding of SARS-CoV-2 convalescent serum by Lu Lu, Allen Wing-Ho Chu, Ricky Ruiqi Zhang, Wan-Mui Chan, Jonathan Daniel Ip, Hoi-Wah Tsoi, Lin-lei Chen, Jian-Piao Cai, David Christopher Lung, Anthony Raymond Tam, Yat-Sun Yau, Mike Yat-Wah Kwan, Wing-Kin To, Owen Tak-Yin Tsang, Larry Lap-Yip Lee, Haisu Yi, Tak-Chuen Ip, Rosana Wing-Shan Poon, Gilman Kit-Hang Siu, Bobo Wing-Yee Mok, Vincent Chi-Chung Cheng, Kwok Hung Chan, Kwok-Yung Yuen, Ivan Fan-Ngai Hung, Kelvin Kai-Wang To

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Probable airborne transmission of Burkholderia pseudomallei causing an urban outbreak of melioidosis during typhoon season in Hong Kong, China by Wing-Gi Wu, Marcus Ho-Hin Shum, Ivan Tak-Fai Wong, Kelvin Keru Lu, Lam-Kwong Lee, Jake Siu-Lun Leung, Hiu-Yin Lao, Annie Wing-Tung Lee, Pak-Ting Hau, Chloe Toi-Mei Chan, Harmen Fung-Tin Wong, Sharon Ka-Yee Fung, Sally Choi-Ying Wong, Iain Chi-Fung Ng, Timothy Ting-Leung Ng, Ning Chow, Alex Yat-Man Ho, Mei Fan Hung, Franklin Wang-Ngai Chow, Maureen Mo-Lin Wong, Wing-Kin To, Tommy Tsan-Yuk Lam, Kristine Shik Luk, Gilman Kit-Hang Siu

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