SPINNAKER: an R-based tool to highlight key RNA interactions in complex biological networks by Paola Paci, Giulia Fiscon

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SAveRUNNER: an R-based tool for drug repurposing by Giulia Fiscon, Paola Paci

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SAveRUNNER: A network-based algorithm for drug repurposing and its application to COVID-19. by Giulia Fiscon, Federica Conte, Lorenzo Farina, Paola Paci

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A Transcriptome- and Interactome-Based Analysis Identifies Repurposable Drugs for Human Breast Cancer Subtypes by Federica Conte, Pasquale Sibilio, Giulia Fiscon, Paola Paci

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A Comparison of Network-Based Methods for Drug Repurposing along with an Application to Human Complex Diseases by Giulia Fiscon, Federica Conte, Lorenzo Farina, Paola Paci

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Hepatitis B Virus and microRNAs: A Bioinformatics Approach by Verdiana Zulian, Giulia Fiscon, Paola Paci, Anna Rosa Garbuglia

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Identification of Potential Repurposable Drugs in Alzheimer’s Disease Exploiting a Bioinformatics Analysis by Giulia Fiscon, Pasquale Sibilio, Alessio Funari, Federica Conte, Paola Paci

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Repurposing Histaminergic Drugs in Multiple Sclerosis by Susanna Amadio, Federica Conte, Giorgia Esposito, Giulia Fiscon, Paola Paci, Cinzia Volonté

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Role of the long non-coding RNA PVT1 in the dysregulation of the ceRNA-ceRNA network in human breast cancer. by Federica Conte, Giulia Fiscon, Matteo Chiara, Teresa Colombo, Lorenzo Farina, Paola Paci

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Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery by Paola Paci, Giulia Fiscon, Federica Conte, Rui-Sheng Wang, Lorenzo Farina, Joseph Loscalzo

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Comprehensive network medicine-based drug repositioning via integration of therapeutic efficacy and side effects by Paola Paci, Giulia Fiscon, Federica Conte, Rui-Sheng Wang, Diane E. Handy, Lorenzo Farina, Joseph Loscalzo

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The role of FOSL1 in stem-like cell reprogramming processes by Valeria Pecce, Antonella Verrienti, Giulia Fiscon, Marialuisa Sponziello, Federica Conte, Luana Abballe, Cosimo Durante, Lorenzo Farina, Sebastiano Filetti, Paola Paci

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Combining EEG signal processing with supervised methods for Alzheimer’s patients classification by Giulia Fiscon, Emanuel Weitschek, Alessio Cialini, Giovanni Felici, Paola Bertolazzi, Simona De Salvo, Alessia Bramanti, Placido Bramanti, Maria Cristina De Cola

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The New Paradigm of Network Medicine to Analyze Breast Cancer Phenotypes by Anna Maria Grimaldi, Federica Conte, Katia Pane, Giulia Fiscon, Peppino Mirabelli, Simona Baselice, Rosa Giannatiempo, Francesco Messina, Monica Franzese, Marco Salvatore, Paola Paci, Mariarosaria Incoronato

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A Network of MicroRNAs and mRNAs Involved in Melanosome Maturation and Trafficking Defines the Lower Response of Pigmentable Melanoma Cells to Targeted Therapy by Marianna Vitiello, Alberto Mercatanti, Maurizio Salvatore Podda, Caterina Baldanzi, Antonella Prantera, Samanta Sarti, Milena Rizzo, Alessandra Salvetti, Federica Conte, Giulia Fiscon, Paola Paci, Laura Poliseno

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An ontology-based approach for modelling and querying Alzheimer’s disease data by Francesco Taglino, Fabio Cumbo, Giulia Antognoli, Ivan Arisi, Mara D’Onofrio, Federico Perazzoni, Roger Voyat, Giulia Fiscon, Federica Conte, Marco Canevelli, Giuseppe Bruno, Patrizia Mecocci, Paola Bertolazzi, for the Alzheimer’s Disease Neuroimaging Initiative

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The Impact of Drug–Drug Interactions on the Toxicity Profile of Combined Treatment with BRAF and MEK Inhibitors in Patients with BRAF-Mutated Metastatic Melanoma by Silvia Mezi, Andrea Botticelli, Simone Scagnoli, Giulia Pomati, Giulia Fiscon, Federica De Galitiis, Francesca Romana Di Pietro, Sofia Verkhovskaia, Sasan Amirhassankhani, Simona Pisegna, Giovanna Gentile, Maurizio Simmaco, Bjoern Gohlke, Robert Preissner, Paolo Marchetti

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A network approach to define the predictive role of immune profile on tumor response and toxicity of anti PD-1 single agent immunotherapy in patients with solid tumors by Silvia Mezi, Giulia Pomati, Giulia Fiscon, Sasan Amirhassankhani, Ilaria Grazia Zizzari, Chiara Napoletano, Aurelia Rughetti, Ernesto Rossi, Giovanni Schinzari, Giovanni Schinzari, Giampaolo Tortora, Giampaolo Tortora, Gaetano Lanzetta, Giulia D’Amati, Marianna Nuti, Daniele Santini, Andrea Botticelli

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Transcriptomics and Metabolomics Integration Reveals Redox-Dependent Metabolic Rewiring in Breast Cancer Cells by Marcella Bonanomi, Noemi Salmistraro, Giulia Fiscon, Federica Conte, Paola Paci, Valentina Bravatà, Giusi Irma Forte, Tatiana Volpari, Manuela Scorza, Fabrizia Mastroianni, Stefano D’Errico, Elenio Avolio, Gennaro Piccialli, Anna Maria Colangelo, Marco Vanoni, Daniela Gaglio, Lilia Alberghina

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Genomic and Immune Approach in Platinum Refractory HPV-Negative Head and Neck Squamous Cell Carcinoma Patients Treated with Immunotherapy: A Novel Combined Profile by Silvia Mezi, Giulia Pomati, Ilaria Grazia Zizzari, Alessandra Di Filippo, Bruna Cerbelli, Alessio Cirillo, Giulia Fiscon, Sasan Amirhassankhani, Valentino Valentini, Marco De Vincentiis, Alessandro Corsi, Cira Di Gioia, Vincenzo Tombolini, Carlo Della Rocca, Antonella Polimeni, Marianna Nuti, Paolo Marchetti, Andrea Botticelli

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