Cancer genomes tolerate deleterious coding mutations through somatic copy number amplifications of wild-type regions by Fabio Alfieri, Giulio Caravagna, Martin H. Schaefer

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Distributed delays in a hybrid model of tumor-Immune system interplay by Giulio Caravagna, Alex Graudenzi, Alberto d’Onofrio

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Author Correction: Cancer genomes tolerate deleterious coding mutations through somatic copy number amplifications of wild-type regions by Fabio Alfieri, Giulio Caravagna, Martin H. Schaefer

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Aspects of multiscale modelling in a process algebra for biological systems by Roberto Barbuti, Giulio Caravagna, Paolo Milazzo, Andrea Maggiolo-Schettini, Simone Tini

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Deep Learning-Informed Bayesian Model-Based Analysis to Estimate Superspreading Events in Epidemic Outbreaks by Arianna Tasciotti, Federico Urban, Federica de Dea, Luca Bortolussi, Giulio Caravagna, Alberto D'Onofrio

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Data Symmetries and Learning in Fully Connected Neural Networks by Fabio Anselmi, Luca Manzoni, Alberto D'onofrio, Alex Rodriguez, Giulio Caravagna, Luca Bortolussi, Francesca Cairoli

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Spatially constrained tumour growth affects the patterns of clonal selection and neutral drift in cancer genomic data. by Ketevan Chkhaidze, Timon Heide, Benjamin Werner, Marc J Williams, Weini Huang, Giulio Caravagna, Trevor A Graham, Andrea Sottoriva

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A Bayesian method to infer copy number clones from single-cell RNA and ATAC sequencing. by Lucrezia Patruno, Salvatore Milite, Riccardo Bergamin, Nicola Calonaci, Alberto D'Onofrio, Fabio Anselmi, Marco Antoniotti, Alex Graudenzi, Giulio Caravagna

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Clinical application of tumour-in-normal contamination assessment from whole genome sequencing by Jonathan Mitchell, Salvatore Milite, Jack Bartram, Susan Walker, Nadezda Volkova, Olena Yavorska, Magdalena Zarowiecki, Jane Chalker, Rebecca Thomas, Luca Vago, Alona Sosinsky, Giulio Caravagna

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Computational validation of clonal and subclonal copy number alterations from bulk tumor sequencing using CNAqc by Alice Antonello, Riccardo Bergamin, Nicola Calonaci, Jacob Househam, Salvatore Milite, Marc J. Williams, Fabio Anselmi, Alberto d’Onofrio, Vasavi Sundaram, Alona Sosinsky, William C. H. Cross, Giulio Caravagna

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Evolutionary signatures of human cancers revealed via genomic analysis of over 35,000 patients by Diletta Fontana, Ilaria Crespiatico, Valentina Crippa, Federica Malighetti, Matteo Villa, Fabrizio Angaroni, Luca De Sano, Andrea Aroldi, Marco Antoniotti, Giulio Caravagna, Rocco Piazza, Alex Graudenzi, Luca Mologni, Daniele Ramazzotti

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Pan-cancer landscape of AID-related mutations, composite mutations, and their potential role in the ICI response by Isaias Hernández-Verdin, Kadir C. Akdemir, Daniele Ramazzotti, Giulio Caravagna, Karim Labreche, Karima Mokhtari, Khê Hoang-Xuan, Matthieu Peyre, Franck Bielle, Mehdi Touat, Ahmed Idbaih, Alex Duval, Marc Sanson, Agustí Alentorn

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Early tolerance and late persistence as alternative drug responses in cancer by Simona Punzi, Davide Cittaro, Guido Gatti, Gemma Crupi, Oronza A. Botrugno, Antonino Alex Cartalemi, Alon Gutfreund, Caterina Oneto, Valentina Giansanti, Chiara Battistini, Giovanni Santacatterina, Lucrezia Patruno, Ilaria Villanti, Martina Palumbo, Daniel J. Laverty, Francesca Giannese, Alex Graudenzi, Giulio Caravagna, Marco Antoniotti, Zachary Nagel, Ugo Cavallaro, Luisa Lanfrancone, Timothy A. Yap, Giulio Draetta, Nathalie Balaban, Giovanni Tonon

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S143: NATURAL CLONAL EVOLUTION OF CHRONIC LYMPHOCYTIC LEUKEMIA WITH BIMODAL CD49D EXPRESSION REVEALS CD49D PLASTICITY by Erika Tissino, Nicola Calonaci, Federico Pozzo, Filippo Vit, Annalisa Gaglio, Lodovico Terzi DI Bergamo, Tamara Bittolo, Francesca Maria Rossi, Robel Papotti, Ilaria Catarossi, Eva Zaina, Paola Nanni, Riccardo Bergamin, Leonardo Egidi, Giovanni Santacatterina, Salvatore Milite, Maria Ilaria Del Principe, Roberta Laureana, Jacopo Olivieri, Francesco Zaja, Annalisa Chiarenza, Davide Rossi, Riccardo Bomben, Valter Gattei, Antonella Zucchetto, Giulio Caravagna

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