Bacterial phylogenetic reconstruction from whole genomes is robust to recombination but demographic inference is not by Hedge, J, Wilson, DJ

Practical approaches for detecting selection in microbial genomes by Hedge, J, Wilson, D

Evolutionary processes driving the rise and fall of Staphylococcus aureus ST239, a dominant hybrid pathogen by Gill, JL, Hedge, J, Wilson, DJ, MacLean, RC

Efflux pump activity potentiates the evolution of antibiotic resistance across S. aureus isolates by Papkou, A, Hedge, J, Kapel, N, Young, B, Maclean, RC

Mycobacterium chimaera isolates from heater–cooler units, United Kingdom by Hedge, J, Lamagni, T, Moore, G, Walker, J, Crook, D, Chand, M

Rapid evolution and host immunity drive the rise and fall of carbapenem resistance during an acute Pseudomonas aeruginosa infection by Wheatley, R, Diaz Caballero, J, Kapel, N, Jangir, P, Hedge, J, Quinn, A, Maclean, RC, Et al.

Study of blood flow behaviour in microchannels by Marson, S, Benade, M, Attia, U, Allen, D, Kersaudy Kerhoas, M, Hedge, J, Morgan, S, Larcombe, L, Alcock, JR

Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England by Wong, T, Dearlove, B, Hedge, J, Giess, A, Piazza, P, Trebes, A, Paul, J, Smit, E, Smith, E, Sutton, J, Wilcox, M, Dingle, K, Peto, T, Crook, D, Wilson, D, Wyllie, D

Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England. by Wong, T, Dearlove, B, Hedge, J, Giess, A, Piazza, P, Trebes, A, Paul, J, Smit, E, Smith, E, Sutton, J, Wilcox, M, Dingle, K, Peto, T, Crook, D, Wilson, D, Wyllie, D

Evolutionary dynamics of local pandemic H1N1/2009 influenza virus lineages revealed by whole-genome analysis. by Baillie, G, Galiano, M, Agapow, P, Myers, R, Chiam, R, Gall, A, Palser, A, Watson, S, Hedge, J, Underwood, A, Platt, S, McLean, E, Pebody, R, Rambaut, A, Green, J, Daniels, R, Pybus, O, Kellam, P, Zambon, M

Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study. by Walker, T, Kohl, T, Omar, S, Hedge, J, Del Ojo Elias, C, Bradley, P, Iqbal, Z, Feuerriegel, S, Niehaus, K, Wilson, D, Clifton, D, Kapatai, G, Ip, C, Bowden, R, Drobniewski, F, Allix-Béguec, C, Gaudin, C, Parkhill, J, Diel, R, Supply, P, Crook, D, Smith, E, Walker, A, Ismail, N, Niemann, S, Peto, T

Insidious risk of severe Mycobacterium chimaera infection in cardiac surgery patients. by Chand, M, Lamagni, T, Kranzer, K, Hedge, J, Moore, G, Parks, S, Collins, S, Del Ojo Elias, C, Ahmed, N, Brown, T, Smith, E, Hoffman, P, Kirwan, P, Mason, B, Smith-Palmer, A, Veal, P, Lalor, M, Bennett, A, Walker, J, Yeap, A, Isidro Carrion Martin, A, Dolan, G, Bhatt, S, Skingsley, A, Charlett, A, Pearce, D, Russell, K, Kendall, S, Klein, A, Robins, S, Schelenz, S, Newsholme, W, Thomas, S, Collyns, T, Davies, E, McMenamin, J, Doherty, L, Peto, T, Crook, D, Zambon, M, Phin, N