Editorial: Systems immunology to advance vaccine development by Jue Hou, Helder I. Nakaya, Helder I. Nakaya

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A reasonable request for true data sharing by Tiago Lubiana, Helder I. Nakaya

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Antigenicity prediction and vaccine recommendation of human influenza virus A (H3N2) using convolutional neural networks by Eva K. Lee, Haozheng Tian, Helder I. Nakaya

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Editorial: User-Friendly Tools Applied to Genetics or Systems Biology by Helder I. Nakaya, Juilee Thakar, Juilee Thakar, Vinicius Maracaja-Coutinho

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Why should obese youth be prioritized in COVID-19 vaccination programs? A nationwide retrospective study by Michelle G. Discacciati, Sirlei Siani, Ana Campa, Helder I Nakaya

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Poly I:C elicits broader and stronger humoral and cellular responses to a Plasmodium vivax circumsporozoite protein malaria vaccine than Alhydrogel in mice by Tiffany B. L. Costa-Gouvea, Katia S. Françoso, Rodolfo F. Marques, Alba Marina Gimenez, Ana C. M. Faria, Leonardo M. Cariste, Mariana R. Dominguez, José Ronnie C. Vasconcelos, Helder I. Nakaya, Helder I. Nakaya, Helder I. Nakaya, Eduardo L. V. Silveira, Irene S. Soares

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Assessing the Impact of Sample Heterogeneity on Transcriptome Analysis of Human Diseases Using MDP Webtool by André N. A. Gonçalves, Melissa Lever, Pedro S. T. Russo, Bruno Gomes-Correia, Alysson H. Urbanski, Gabriele Pollara, Mahdad Noursadeghi, Vinicius Maracaja-Coutinho, Helder I. Nakaya, Helder I. Nakaya

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StructRNAfinder: an automated pipeline and web server for RNA families prediction by Raúl Arias-Carrasco, Yessenia Vásquez-Morán, Helder I. Nakaya, Vinicius Maracaja-Coutinho

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Chikungunya patient transcriptional signatures faithfully recapitulated in a C57BL/6J mouse model by Cameron R. Bishop, Felipe Ten Caten, Helder I. Nakaya, Andreas Suhrbier, Andreas Suhrbier

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Differentiation of Memory CD8 T Cells Unravel Gene Expression Pattern Common to Effector and Memory Precursors by Vanessa Neitzke-Montinelli, Carolina Calôba, Guilherme Melo, Bianca B. Frade, Enzo Caramez, Luciano Mazzoccoli, André N. A. Gonçalves, Helder I. Nakaya, Helder I. Nakaya, Renata M. Pereira, Miriam B. F. Werneck, João P. B. Viola

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OUTBREAK: a user-friendly georeferencing online tool for disease surveillance by Raúl Arias-Carrasco, Jeevan Giddaluru, Lucas E. Cardozo, Felipe Martins, Vinicius Maracaja-Coutinho, Helder I. Nakaya

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Noninvasive prenatal paternity determination using microhaplotypes: a pilot study by Jaqueline Yu Ting Wang, Martin R. Whittle, Renato David Puga, Anatoly Yambartsev, André Fujita, Helder I. Nakaya

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The single-cell transcriptome of mTECs and CD4+ thymocytes under adhesion revealed heterogeneity of mTECs and a network controlled by Aire and lncRNAs by Cíntia J. Monteiro, Max J. Duarte, Mayara Cristina V. Machado, Romário S. Mascarenhas, Patrícia V. Bonini Palma, Henry D. Mogollón García, Helder I. Nakaya, Helder I. Nakaya, Thiago M. Cunha, Eduardo A. Donadi, Geraldo A. Passos, Geraldo A. Passos, Geraldo A. Passos

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Flavivirus-Mediating B Cell Differentiation Into Antibody-Secreting Cells in Humans Is Associated With the Activation of the Tryptophan Metabolism by Vivian Bonezi, Allan H. D. Cataneo, Maryana S. F. Branquinho, Maysa B. B. Silva, Patricia Gonzalez-Dias, Patricia Gonzalez-Dias, Samuel S. Pereira, Luís C. de Souza Ferreira, Helder I. Nakaya, Helder I. Nakaya, Ana Campa, Pryscilla F. Wowk, Eduardo L. V. Silveira

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Ten quick tips for harnessing the power of ChatGPT in computational biology. by Tiago Lubiana, Rafael Lopes, Pedro Medeiros, Juan Carlo Silva, Andre Nicolau Aquime Goncalves, Vinicius Maracaja-Coutinho, Helder I Nakaya

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webCEMiTool: Co-expression Modular Analysis Made Easy by Lucas E. Cardozo, Pedro S. T. Russo, Bruno Gomes-Correia, Mariana Araujo-Pereira, Gonzalo Sepúlveda-Hermosilla, Vinicius Maracaja-Coutinho, Helder I. Nakaya

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Methods for predicting vaccine immunogenicity and reactogenicity by Patrícia Gonzalez-Dias, Eva K. Lee, Sara Sorgi, Diógenes S. de Lima, Alysson H. Urbanski, Eduardo Lv Silveira, Helder I. Nakaya

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Neonatal T Follicular Helper Cells Are Lodged in a Pre-T Follicular Helper Stage Favoring Innate Over Adaptive Germinal Center Responses by Beatris Mastelic-Gavillet, Maria Vono, Patrícia Gonzalez-Dias, Frederico Moraes Ferreira, Lucas Cardozo, Paul-Henri Lambert, Helder I. Nakaya, Claire-Anne Siegrist

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The evolution of knowledge on genes associated with human diseases by Thomaz Lüscher-Dias, Rodrigo Juliani Siqueira Dalmolin, Paulo de Paiva Amaral, Tiago Lubiana Alves, Viviane Schuch, Glória Regina Franco, Helder I. Nakaya

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Comparative transcriptomic analysis of long noncoding RNAs in Leishmania-infected human macrophages by Juliane C. R. Fernandes, Juliane C. R. Fernandes, André N. A. Gonçalves, Lucile M. Floeter-Winter, Helder I. Nakaya, Sandra M. Muxel

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