RNA Accessibility in cubic time by Hofacker Ivo L, Mückstein Ullrike, Bernhart Stephan H

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LocARNA-P: Accurate boundary prediction and improved detection of structural RNAs by Joshi, T., Hofacker, Ivo L., Stadler, P. F., Backofen, Rolf, Will, Sebastian

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Algebraic comparison of metabolic networks, phylogenetic inference, and metabolic innovation by Hofacker Ivo L, Flamm Christoph, Forst Christian V, Stadler Peter F

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RNA Folding with Soft Constraints: Reconciliation of Probing Data and Thermodynamic Secondary Structure Prediction by Mag Washietl, Stefan, Hofacker, Ivo L., Stadler, Peter F., Kellis, Manolis

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RNAalifold: improved consensus structure prediction for RNA alignments by Stadler Peter F, Gruber Andreas R, Will Sebastian, Hofacker Ivo L, Bernhart Stephan H

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Detection of RNA structures in porcine EST data and related mammals by Seemann Stefan E, Gilchrist Michael J, Hofacker Ivo L, Stadler Peter F, Gorodkin Jan

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ViennaRNA Package 2.0 by Lorenz Ronny, Bernhart Stephan H, Höner zu Siederdissen Christian, Tafer Hakim, Flamm Christoph, Stadler Peter F, Hofacker Ivo L

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