G+C content dominates intrinsic nucleosome occupancy by Hughes Timothy R, Tillo Desiree

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A systematic search for new mammalian noncoding RNAs indicates little conserved intergenic transcription by Blencowe Benjamin J, Babak Tomas, Hughes Timothy R

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Effects of weight loss and insulin reduction on arterial stiffness in the SAVE trial by Hughes Timothy M, Althouse Andrew D, Niemczyk Nancy A, Hawkins Marquis S, Kuipers Allison L, Sutton-Tyrrell Kim

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Simultaneous host and parasite expression profiling identifies tissue-specific transcriptional programs associated with susceptibility or resistance to experimental cerebral malari... by Liles W Conrad, Mohammad Naveed, Peña-Castillo Lourdes, Lovegrove Fiona E, Hughes Timothy R, Kain Kevin C

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Limitations and possibilities of low cell number ChIP-seq by Gilfillan Gregor D, Hughes Timothy, Sheng Ying, Hjorthaug Hanne S, Straub Tobias, Gervin Kristina, Harris Jennifer R, Undlien Dag E, Lyle Robert

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Conservation of core gene expression in vertebrate tissues by Chan Esther T, Quon Gerald T, Chua Gordon, Babak Tomas, Trochesset Miles, Zirngibl Ralph A, Aubin Jane, Ratcliffe Michael JH, Wilde Andrew, Brudno Michael, Morris Quaid D, Hughes Timothy R

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Predicting the binding preference of transcription factors to individual DNA k-mers by Bulyk, Martha L., Philippakis, Anthony A., Alleyne, Trevis M., Peña-Castillo, Lourdes, Badis, Gwenael, Talukder, Shaheynoor, Berger, Michael F., Gehrke, Andrew R., Morris, Quaid D., Hughes, Timothy R.

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Objective sequence-based subfamily classifications of mouse homeodomains reflect their in vitro DNA-binding preferences by Santos, Miguel A., Turinsky, Andrei L., Ong, Serene, Tsai, Jennifer, Berger, Michael F., Badis, Gwenael, Talukder, Shaheynoor, Gehrke, Andrew R., Hughes, Timothy R., Wodak, Shoshana J., Bulyk, Martha L.

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The functional landscape of mouse gene expression by Zhang Wen, Morris Quaid D, Chang Richard, Shai Ofer, Bakowski Malina A, Mitsakakis Nicholas, Mohammad Naveed, Robinson Mark D, Zirngibl Ralph, Somogyi Eszter, Laurin Nancy, Eftekharpour Eftekhar, Sat Eric, Grigull Jörg, Pan Qun, Peng Wen-Tao, Krogan Nevan, Greenblatt Jack, Fehlings Michael, van der Kooy Derek, Aubin Jane, Bruneau Benoit G, Rossant Janet, Blencowe Benjamin J, Frey Brendan J, Hughes Timothy R

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