Generalized linear model for mapping discrete trait loci implemented with LASSO algorithm. by Jun Xing, Huijiang Gao, Yang Wu, Yani Wu, Hongwang Li, Runqing Yang

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Comparison of Genotype Imputation for SNP Array and Low-Coverage Whole-Genome Sequencing Data by Tianyu Deng, Pengfei Zhang, Dorian Garrick, Huijiang Gao, Lixian Wang, Fuping Zhao

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Hereditary Basis of Coat Color and Excellent Feed Conversion Rate of Red Angus Cattle by Next-Generation Sequencing Data by Yongmeng He, Yongfu Huang, Shizhi Wang, Lupei Zhang, Huijiang Gao, Yongju Zhao, Guangxin E

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Evaluation of Linear Programming and Optimal Contribution Selection Approaches for Long-Term Selection on Beef Cattle Breeding by Xu Zheng, Tianzhen Wang, Qunhao Niu, Jiayuan Wu, Zhida Zhao, Huijiang Gao, Junya Li, Lingyang Xu

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Genomic Prediction Using LD-Based Haplotypes Inferred From High-Density Chip and Imputed Sequence Variants in Chinese Simmental Beef Cattle by Hongwei Li, Bo Zhu, Bo Zhu, Ling Xu, Zezhao Wang, Lei Xu, Peinuo Zhou, Han Gao, Peng Guo, Yan Chen, Xue Gao, Lupei Zhang, Huijiang Gao, Huijiang Gao, Wentao Cai, Lingyang Xu, Junya Li, Junya Li

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Long-Term Impact of Genomic Selection on Genetic Gain Using Different SNP Density by Xu Zheng, Tianliu Zhang, Tianzhen Wang, Qunhao Niu, Jiayuan Wu, Zezhao Wang, Huijiang Gao, Junya Li, Lingyang Xu

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Genome-Wide Association Study Based on Random Regression Model Reveals Candidate Genes Associated with Longitudinal Data in Chinese Simmental Beef Cattle by Lili Du, Xinghai Duan, Bingxing An, Tianpeng Chang, Mang Liang, Lingyang Xu, Lupei Zhang, Junya Li, Guangxin E, Huijiang Gao

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PCA-Based Multiple-Trait GWAS Analysis: A Powerful Model for Exploring Pleiotropy by Wengang Zhang, Xue Gao, Xinping Shi, Bo Zhu, Zezhao Wang, Huijiang Gao, Lingyang Xu, Lupei Zhang, Junya Li, Yan Chen

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Genome-Wide Association Analysis Identifies the <i>PMEL</i> Gene Affecting Coat Color and Birth Weight in Simmental × Holstein by Jing Wang, Tingting Fan, Zhenwei Du, Lingyang Xu, Yan Chen, Lupei Zhang, Huijiang Gao, Junya Li, Yi Ma, Xue Gao

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Improving Genomic Predictions in Multi-Breed Cattle Populations: A Comparative Analysis of BayesR and GBLUP Models by Haoran Ma, Hongwei Li, Fei Ge, Huqiong Zhao, Bo Zhu, Lupei Zhang, Huijiang Gao, Lingyang Xu, Junya Li, Zezhao Wang

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Evaluation of GBLUP, BayesB and elastic net for genomic prediction in Chinese Simmental beef cattle. by Xiaoqiao Wang, Jian Miao, Tianpeng Chang, Jiangwei Xia, Binxin An, Yan Li, Lingyang Xu, Lupei Zhang, Xue Gao, Junya Li, Huijiang Gao

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Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle by Lingyang Xu, Liu Yang, Lei Wang, Bo Zhu, Yan Chen, Huijiang Gao, Xue Gao, Lupei Zhang, George E. Liu, Junya Li

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Genome-Wide Association Analysis of Growth Curve Parameters in Chinese Simmental Beef Cattle by Xinghai Duan, Bingxing An, Lili Du, Tianpeng Chang, Mang Liang, Bai-Gao Yang, Lingyang Xu, Lupei Zhang, Junya Li, Guangxin E, Huijiang Gao

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Genome-Wide Association Study Reveals the PLAG1 Gene for Knuckle, Biceps and Shank Weight in Simmental Beef Cattle. by Yuxin Song, Lingyang Xu, Yan Chen, Lupei Zhang, Huijiang Gao, Bo Zhu, Hong Niu, Wengang Zhang, Jiangwei Xia, Xue Gao, Junya Li

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Constructing a comprehensive gene co-expression based interactome in Bos taurus by Yan Chen, Yining Liu, Min Du, Wengang Zhang, Ling Xu, Xue Gao, Lupei Zhang, Huijiang Gao, Lingyang Xu, Junya Li, Min Zhao

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Improving Genomic Prediction with Machine Learning Incorporating TPE for Hyperparameters Optimization by Mang Liang, Bingxing An, Keanning Li, Lili Du, Tianyu Deng, Sheng Cao, Yueying Du, Lingyang Xu, Xue Gao, Lupei Zhang, Junya Li, Huijiang Gao

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A Fast and Powerful Empirical Bayes Method for Genome-Wide Association Studies by Tianpeng Chang, Julong Wei, Mang Liang, Bingxing An, Xiaoqiao Wang, Bo Zhu, Lingyang Xu, Lupei Zhang, Xue Gao, Yan Chen, Junya Li, Huijiang Gao

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Genome-wide scan reveals genetic divergence and diverse adaptive selection in Chinese local cattle by Lingyang Xu, Liu Yang, Bo Zhu, Wengang Zhang, Zezhao Wang, Yan Chen, Lupei Zhang, Xue Gao, Huijiang Gao, George E. Liu, Junya Li

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Multiple association analysis of loci and candidate genes that regulate body size at three growth stages in Simmental beef cattle by Bingxing An, Lei Xu, Jiangwei Xia, Xiaoqiao Wang, Jian Miao, Tianpeng Chang, Meihua Song, Junqing Ni, Lingyang Xu, Lupei Zhang, Junya Li, Huijiang Gao

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The eQTL colocalization and transcriptome-wide association study identify potentially causal genes responsible for economic traits in Simmental beef cattle by Wentao Cai, Yapeng Zhang, Tianpeng Chang, Zezhao Wang, Bo Zhu, Yan Chen, Xue Gao, Lingyang Xu, Lupei Zhang, Huijiang Gao, Jiuzhou Song, Junya Li

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