SAMSA2: a standalone metatranscriptome analysis pipeline by Samuel T. Westreich, Michelle L. Treiber, David A. Mills, Ian Korf, Danielle G. Lemay

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Association of the Lactase Persistence Haplotype Block With Disease Risk in Populations of European Descent by Shannon E. K. Joslin, Blythe P. Durbin-Johnson, Blythe P. Durbin-Johnson, Monica Britton, Matthew L. Settles, Ian Korf, Ian Korf, Danielle G. Lemay, Danielle G. Lemay, Danielle G. Lemay

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Fecal metatranscriptomics of macaques with idiopathic chronic diarrhea reveals altered mucin degradation and fucose utilization by Samuel T. Westreich, Amir Ardeshir, Zeynep Alkan, Mary E. Kable, Ian Korf, Danielle G. Lemay

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Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes by Michelle L. Treiber, Diana H. Taft, Ian Korf, David A. Mills, Danielle G. Lemay

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From genes to milk: genomic organization and epigenetic regulation of the mammary transcriptome. by Danielle G Lemay, Katherine S Pollard, William F Martin, Courtneay Freeman Zadrowski, Joseph Hernandez, Ian Korf, J Bruce German, Monique Rijnkels

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Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species by Colin Kern, Ying Wang, James Chitwood, Ian Korf, Mary Delany, Hans Cheng, Juan F. Medrano, Alison L. Van Eenennaam, Catherine Ernst, Pablo Ross, Huaijun Zhou

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Catastrophic chromosomal restructuring during genome elimination in plants by Ek Han Tan, Isabelle M Henry, Maruthachalam Ravi, Keith R Bradnam, Terezie Mandakova, Mohan PA Marimuthu, Ian Korf, Martin A Lysak, Luca Comai, Simon WL Chan

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Characterization of the contradictory chromatin signatures at the 3' exons of zinc finger genes. by Kimberly R Blahnik, Lei Dou, Lorigail Echipare, Sushma Iyengar, Henriette O'Geen, Erica Sanchez, Yongjun Zhao, Marco A Marra, Martin Hirst, Joseph F Costello, Ian Korf, Peggy J Farnham

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A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues by Michelle M. Halstead, Colin Kern, Perot Saelao, Ying Wang, Ganrea Chanthavixay, Juan F. Medrano, Alison L. Van Eenennaam, Ian Korf, Christopher K. Tuggle, Catherine W. Ernst, Huaijun Zhou, Pablo J. Ross

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Association of Diet and Antimicrobial Resistance in Healthy U.S. Adults by Andrew Oliver, Zhengyao Xue, Yirui T. Villanueva, Blythe Durbin-Johnson, Zeynep Alkan, Diana H. Taft, Jinxin Liu, Ian Korf, Kevin D. Laugero, Charles B. Stephensen, David A. Mills, Mary E. Kable, Danielle G. Lemay

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Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce by Sebastian Reyes-Chin-Wo, Zhiwen Wang, Xinhua Yang, Alexander Kozik, Siwaret Arikit, Chi Song, Liangfeng Xia, Lutz Froenicke, Dean O. Lavelle, María-José Truco, Rui Xia, Shilin Zhu, Chunyan Xu, Huaqin Xu, Xun Xu, Kyle Cox, Ian Korf, Blake C. Meyers, Richard W. Michelmore

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Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research by Colin Kern, Ying Wang, Xiaoqin Xu, Zhangyuan Pan, Michelle Halstead, Ganrea Chanthavixay, Perot Saelao, Susan Waters, Ruidong Xiang, Amanda Chamberlain, Ian Korf, Mary E. Delany, Hans H. Cheng, Juan F. Medrano, Alison L. Van Eenennaam, Chris K. Tuggle, Catherine Ernst, Paul Flicek, Gerald Quon, Pablo Ross, Huaijun Zhou

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First fungal genome sequence from Africa: A preliminary analysis by Brenda Wingfield, Emma Steenkamp, Quentin Santana, Martin Coetzee, Stefan Bam, Irene Barnes, Chrizelle Beukes, Wai Yin Chan, Lieschen de Vos, Gerda Fourie, Melanie Friend, Thomas Gordon, Darryl Herron, Carson Holt, Ian Korf, Marija Kvas, Simon Martin, X. Mlonyeni, Kershney Naidoo, Mmatshepho Phasha, Alisa Postma, Oleg Reva, Heidi Roos, Melissa Simpson, Stephanie Slinski, Bernard Slippers, Rene Sutherland, Nicolaas van der Merwe, Magriet van der Nest, Stephanus Venter, Pieter Wilken, Mark Yandell, Renate Zipfel, Mike Wingfield

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First fungal genome sequence from Africa: A preliminary analysis by Brenda Wingfield, Emma Steenkamp, Quentin Santana, Martin Coetzee, Stefan Bam, Irene Barnes, Chrizelle Beukes, Wai Yin Chan, Lieschen de Vos, Gerda Fourie, Melanie Friend, Thomas Gordon, Darryl Herron, Carson Holt, Ian Korf, Marija Kvas, Simon Martin, X. Mlonyeni, Kershney Naidoo, Mmatshepho Phasha, Alisa Postma, Oleg Reva, Heidi Roos, Melissa Simpson, Stephanie Slinski, Bernard Slippers, Rene Sutherland, Nicolaas van der Merwe, Magriet van der Nest, Stephanus Venter, Pieter Wilken, Mark Yandell, Renate Zipfel, Mike Wingfield

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First fungal genome sequence from Africa: A preliminary analysis by Brenda Wingfield, Emma Steenkamp, Quentin Santana, Martin Coetzee, Stefan Bam, Irene Barnes, Chrizelle Beukes, Wai Yin Chan, Lieschen de Vos, Gerda Fourie, Melanie Friend, Thomas Gordon, Darryl Herron, Carson Holt, Ian Korf, Marija Kvas, Simon Martin, X. Mlonyeni, Kershney Naidoo, Mmatshepho Phasha, Alisa Postma, Oleg Reva, Heidi Roos, Melissa Simpson, Stephanie Slinski, Bernard Slippers, Rene Sutherland, Nicolaas van der Merwe, Magriet van der Nest, Stephanus Venter, Pieter Wilken, Mark Yandell, Renate Zipfel, Mike Wingfield

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First fungal genome sequence from Africa: A preliminary analysis by Brenda Wingfield, Emma Steenkamp, Quentin Santana, Martin Coetzee, Stefan Bam, Irene Barnes, Chrizelle Beukes, Wai Yin Chan, Lieschen de Vos, Gerda Fourie, Melanie Friend, Thomas Gordon, Darryl Herron, Carson Holt, Ian Korf, Marija Kvas, Simon Martin, X. Mlonyeni, Kershney Naidoo, Mmatshepho Phasha, Alisa Postma, Oleg Reva, Heidi Roos, Melissa Simpson, Stephanie Slinski, Bernard Slippers, Rene Sutherland, Nicolaas van der Merwe, Magriet van der Nest, Stephanus Venter, Pieter Wilken, Mark Yandell, Renate Zipfel, Mike Wingfield

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First fungal genome sequence from Africa: A preliminary analysis by Brenda Wingfield, Emma Steenkamp, Quentin Santana, Martin Coetzee, Stefan Bam, Irene Barnes, Chrizelle Beukes, Wai Yin Chan, Lieschen de Vos, Gerda Fourie, Melanie Friend, Thomas Gordon, Darryl Herron, Carson Holt, Ian Korf, Marija Kvas, Simon Martin, X. Mlonyeni, Kershney Naidoo, Mmatshepho Phasha, Alisa Postma, Oleg Reva, Heidi Roos, Melissa Simpson, Stephanie Slinski, Bernard Slippers, Rene Sutherland, Nicolaas van der Merwe, Magriet van der Nest, Stephanus Venter, Pieter Wilken, Mark Yandell, Renate Zipfel, Mike Wingfield

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