The Bacteria Genome Pipeline (BAGEP): an automated, scalable workflow for bacteria genomes with Snakemake by Idowu B. Olawoye, Simon D.W. Frost, Christian T. Happi

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Genomic Characterization of Multidrug-Resistant Pathogenic Enteric Bacteria from Healthy Children in Osun State, Nigeria by Jessica N. Uwanibe, Idowu B. Olawoye, Christian T. Happi, Onikepe A. Folarin

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Emergence and Genomic Characterization of Multidrug Resistant <i>Candida auris</i> in Nigeria, West Africa by Rita Oladele, Jessica N. Uwanibe, Idowu B. Olawoye, Abdul-Wahab O. Ettu, Jacques F. Meis, Christian T. Happi

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The Prevalence of Undiagnosed <i>Salmonella enterica</i> Serovar <i>Typhi</i> in Healthy School-Aged Children in Osun State, Nigeria by Jessica N. Uwanibe, Tolulope A. Kayode, Paul E. Oluniyi, Kazeem Akano, Idowu B. Olawoye, Chinedu A. Ugwu, Christian T. Happi, Onikepe A. Folarin

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Molecular characterization of non-aureus staphylococci and Mammaliicoccus from Hipposideros bats in Southwest Nigeria by Tomiwa O. Adesoji, Uwem E. George, Taofiq A. Sulayman, Jessica N. Uwanibe, Idowu B. Olawoye, Joseph O. Igbokwe, Tobi G. Olanipekun, Richard A. Adeleke, Akintayo I. Akindoyin, Temitope J. Famakinwa, Andrew M. Adamu, Christabel A. Terkuma, Grace O. Ezekiel, Philomena E. Eromon, Anise N. Happi, Taiwo O. Fadare, Adebayo O. Shittu, Christian T. Happi

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Immunological insights into COVID-19 in Southern Nigeria by Chinedu A. Ugwu, Chinedu A. Ugwu, Oluwasina Alao, Oluwasina Alao, Oluwagboadurami G. John, Oluwagboadurami G. John, Blossom Akinnawo, Blossom Akinnawo, Israel Ajayi, Israel Ajayi, Ooreofe Odebode, Ooreofe Odebode, Ifeoluwa Bejide, Allan Campbell, Allan Campbell, Julian Campbell, Julian Campbell, Jolly A. Adole, Jolly A. Adole, Idowu B. Olawoye, Idowu B. Olawoye, Kazeem Akano, Kazeem Akano, Johnson Okolie, Philomena Eromon, Peter Olaitan, Ajibola Olagunoye, Ibukun Adebayo, Victor Adebayo, Elizabeth Babalola, Omowumi Abioye, Nnennaya Ajayi, Emeka Ogah, Kingsley Ukwaja, Sylvanus Okoro, Ogbonnaya Oje, Ojide Chiedozie Kingsley, Matthew Eke, Venatius Onyia, Olivia Achonduh-Atijegbe, Friday Elechi Ewah, Mary Obasi, Violet Igwe, Olufemi Ayodeji, Abejegah Chukwuyem, Sampson Owhin, Nicholas Oyejide, Sylvester Abah, Winifred Ingbian, Moyosoore Osoba, Ahmed Alebiosu, Angalee Nadesalingam, Ernest T. Aguinam, George Carnell, Nina Krause, Andrew Chan, Charlotte George, Rebecca Kinsley, Paul Tonks, Nigel Temperton, Jonathan Heeney, Christian Happi, Christian Happi

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Emergence and spread of two SARS-CoV-2 variants of interest in Nigeria by Idowu B. Olawoye, Paul E. Oluniyi, Judith U. Oguzie, Jessica N. Uwanibe, Tolulope A. Kayode, Testimony J. Olumade, Fehintola V. Ajogbasile, Edyth Parker, Philomena E. Eromon, Priscilla Abechi, Tope A. Sobajo, Chinedu A. Ugwu, Uwem E. George, Femi Ayoade, Kazeem Akano, Nicholas E. Oyejide, Iguosadolo Nosamiefan, Iyanuoluwa Fred-Akintunwa, Kemi Adedotun-Sulaiman, Farida B. Brimmo, Babatunde B. Adegboyega, Courage Philip, Richard A. Adeleke, Grace C. Chukwu, Muhammad I. Ahmed, Oludayo O. Ope-Ewe, Shobi G. Otitoola, Olusola A. Ogunsanya, Mudasiru F. Saibu, Ayotunde E. Sijuwola, Grace O. Ezekiel, Oluwagboadurami G. John, Julie O. Akin-John, Oluwasemilogo O. Akinlo, Olanrewaju O. Fayemi, Testimony O. Ipaye, Deborah C. Nwodo, Abolade E. Omoniyi, Iyobosa B. Omwanghe, Christabel A. Terkuma, Johnson Okolie, Olubukola Ayo-Ale, Odia Ikponmwosa, Ebo Benevolence, Grace O. Naregose, Akhilomen E. Patience, Osiemi Blessing, Airende Micheal, Agbukor Jacqueline, John O. Aiyepada, Paulson Ebhodaghe, Omiunu Racheal, Esumeh Rita, Giwa E. Rosemary, Ehikhametalor Solomon, Ekanem Anieno, Yerumoh Edna, Aire O. Chris, Adomeh I. Donatus, Ephraim Ogbaini-Emovon, Mirabeau Y. Tatfeng, Hannah E. Omunakwe, Mienye Bob-Manuel, Rahaman A. Ahmed, Chika K. Onwuamah, Joseph O. Shaibu, Azuka Okwuraiwe, Anthony E. Ataga, Andrew Bock-Oruma, Funmi Daramola, Ibrahim F. Yusuf, Akinwumi Fajola, Nsikak-Abasi Ntia, Julie J. Ekpo, Anietie E. Moses, Beatrice W. Moore-Igwe, Oluwatosin E. Fakayode, Monilade Akinola, Ibrahim M. Kida, Bamidele S. Oderinde, Zara W. Wudiri, Oluwapelumi O. Adeyemi, Olusola A. Akanbi, Anthony Ahumibe, Afolabi Akinpelu, Oyeronke Ayansola, Olajumoke Babatunde, Adesuyi A. Omoare, Chimaobi Chukwu, Nwando G. Mba, Ewean C. Omoruyi, Olasunkanmi Olisa, Olatunji K. Akande, Ifeanyi E. Nwafor, Matthew A. Ekeh, Erim Ndoma, Richard L. Ewah, Rosemary O. Duruihuoma, Augustine Abu, Elizabeth Odeh, Venatius Onyia, Chiedozie K. Ojide, Sylvanus Okoro, Daniel Igwe, Emeka O. Ogah, Kamran Khan, Nnennaya A. Ajayi, Collins N. Ugwu, Kingsley N. Ukwaja, Ngozi I. Ugwu, Chukwuyem Abejegah, Nelson Adedosu, Olufemi Ayodeji, Ahmed A. Liasu, Rafiu O. Isamotu, Galadima Gadzama, Brittany A. Petros, Katherine J. Siddle, Stephen F. Schaffner, George Akpede, Cyril Oshomah Erameh, Marycelin M. Baba, Femi Oladiji, Rosemary Audu, Nnaemeka Ndodo, Adeola Fowotade, Sylvanus Okogbenin, Peter O. Okokhere, Danny J. Park, Bronwyn L. Mcannis, Ifedayo M. Adetifa, Chikwe Ihekweazu, Babatunde L. Salako, Oyewale Tomori, Anise N. Happi, Onikepe A. Folarin, Kristian G. Andersen, Pardis C. Sabeti, Christian T. Happi

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