James J. Davis

Davis in 1905 James John Davis (October 27, 1873November 22, 1947) was a Welsh-born American businessman, author and Republican Party politician in Pittsburgh, Pennsylvania. He served as U.S. Secretary of Labor and represented Pennsylvania in the United States Senate. He was also known by the nicknames of the "Iron Puddler" and "Puddler Jim." Provided by Wikipedia
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  1. 1
    Classification of bacterial plasmid and chromosome derived sequences using machine learning.

    Classification of bacterial plasmid and chromosome derived sequences using machine learning. by Xiaohui Zou, Marcus Nguyen, Jamie Overbeek, Bin Cao, James J Davis

    Published 2022-01-01
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  2. 2
    Predicting antimicrobial resistance using conserved genes.

    Predicting antimicrobial resistance using conserved genes. by Marcus Nguyen, Robert Olson, Maulik Shukla, Margo VanOeffelen, James J Davis

    Published 2020-10-01
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  3. 3
    Whole-Genome Sequencing of Human Clinical <named-content content-type="genus-species">Klebsiella pneumoniae</named-content> Isolates Reveals Misidentification and Misunderstandings of <named-content content-type="genus-species">Klebsiella pneumoniae</named-content>, <named-content content-type="genus-species">Klebsiella variicola</named-content>, and <named-content content-type="genus-species">Klebsiella quasipneumoniae</named-content>

    Whole-Genome Sequencing of Human Clinical <named-content content-type="genus-species">Klebsiella pneumoniae</named-content> Isolates Reveals Misidentification and Misunderstandings... by S. Wesley Long, Sarah E. Linson, Matthew Ojeda Saavedra, Concepcion Cantu, James J. Davis, Thomas Brettin, Randall J. Olsen

    Published 2017-08-01
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  4. 4
    Predicting variable gene content in Escherichia coli using conserved genes

    Predicting variable gene content in Escherichia coli using conserved genes by Marcus Nguyen, Zachary Elmore, Clay Ihle, Francesco S. Moen, Adam D. Slater, Benjamin N. Turner, Bruce Parrello, Aaron A. Best, James J. Davis

    Published 2023-08-01
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  5. 5
    PATtyFams: Protein families for the microbial genomes in the PATRIC database

    PATtyFams: Protein families for the microbial genomes in the PATRIC database by James J Davis, James J Davis, Svetlana eGerdes, Svetlana eGerdes, Gary J Olsen, Robert eOlson, Robert eOlson, Gordon D Pusch, Gordon D Pusch, Maulik eShukla, Maulik eShukla, Veronika eVonstein, Veronika eVonstein, Alice R Wattam, Hyunseung eYoo, Hyunseung eYoo

    Published 2016-02-01
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  6. 6
    SourceFinder: a Machine-Learning-Based Tool for Identification of Chromosomal, Plasmid, and Bacteriophage Sequences from Assemblies

    SourceFinder: a Machine-Learning-Based Tool for Identification of Chromosomal, Plasmid, and Bacteriophage Sequences from Assemblies by Derya Aytan-Aktug, Vladislav Grigorjev, Judit Szarvas, Philip T. L. C. Clausen, Patrick Munk, Marcus Nguyen, James J. Davis, Frank M. Aarestrup, Ole Lund

    Published 2022-12-01
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  7. 7
    PlasmidHostFinder: Prediction of Plasmid Hosts Using Random Forest

    PlasmidHostFinder: Prediction of Plasmid Hosts Using Random Forest by Derya Aytan-Aktug, Philip T. L. C. Clausen, Judit Szarvas, Patrick Munk, Saria Otani, Marcus Nguyen, James J. Davis, Ole Lund, Frank M. Aarestrup

    Published 2022-04-01
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  8. 8
    Population Genomic Analysis of 1,777 Extended-Spectrum Beta-Lactamase-Producing <italic toggle="yes">Klebsiella pneumoniae</italic> Isolates, Houston, Texas: Unexpected Abundance of Clonal Group 307

    Population Genomic Analysis of 1,777 Extended-Spectrum Beta-Lactamase-Producing <italic toggle="yes">Klebsiella pneumoniae</italic> Isolates, Houston, Texas: Unexpected Abundance o... by S. Wesley Long, Randall J. Olsen, Todd N. Eagar, Stephen B. Beres, Picheng Zhao, James J. Davis, Thomas Brettin, Fangfang Xia, James M. Musser

    Published 2017-07-01
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  9. 9
    Erratum for Pincus et al., “A Genome-Based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates”

    Erratum for Pincus et al., “A Genome-Based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates” by Nathan B. Pincus, Egon A. Ozer, Jonathan P. Allen, Marcus Nguyen, James J. Davis, Deborah R. Winter, Chih-Hsien Chuang, Cheng-Hsun Chiu, Laura Zamorano, Antonio Oliver, Alan R. Hauser

    Published 2021-02-01
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  10. 10
    A Genome-Based Model to Predict the Virulence of <named-content content-type="genus-species">Pseudomonas aeruginosa</named-content> Isolates

    A Genome-Based Model to Predict the Virulence of <named-content content-type="genus-species">Pseudomonas aeruginosa</named-content> Isolates by Nathan B. Pincus, Egon A. Ozer, Jonathan P. Allen, Marcus Nguyen, James J. Davis, Deborah R. Winter, Chih-Hsien Chuang, Cheng-Hsun Chiu, Laura Zamorano, Antonio Oliver, Alan R. Hauser

    Published 2020-08-01
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  11. 11
    Selective targeting of brain tumors with gold nanoparticle-induced radiosensitization.

    Selective targeting of brain tumors with gold nanoparticle-induced radiosensitization. by Daniel Y Joh, Lova Sun, Melissa Stangl, Ajlan Al Zaki, Surya Murty, Phillip P Santoiemma, James J Davis, Brian C Baumann, Michelle Alonso-Basanta, Dongha Bhang, Gary D Kao, Andrew Tsourkas, Jay F Dorsey

    Published 2013-01-01
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  12. 12
    Transmission history of SARS-CoV-2 in humans and white-tailed deer

    Transmission history of SARS-CoV-2 in humans and white-tailed deer by Katriina Willgert, Xavier Didelot, Meera Surendran-Nair, Suresh V. Kuchipudi, Rachel M. Ruden, Michele Yon, Ruth H. Nissly, Kurt J. Vandegrift, Rahul K. Nelli, Lingling Li, Bhushan M. Jayarao, Nicole Levine, Randall J. Olsen, James J. Davis, James M. Musser, Peter J. Hudson, Vivek Kapur, Andrew J. K. Conlan

    Published 2022-07-01
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  13. 13
    Molecular Architecture of Early Dissemination and Massive Second Wave of the SARS-CoV-2 Virus in a Major Metropolitan Area

    Molecular Architecture of Early Dissemination and Massive Second Wave of the SARS-CoV-2 Virus in a Major Metropolitan Area by S. Wesley Long, Randall J. Olsen, Paul A. Christensen, David W. Bernard, James J. Davis, Maulik Shukla, Marcus Nguyen, Matthew Ojeda Saavedra, Prasanti Yerramilli, Layne Pruitt, Sishir Subedi, Hung-Che Kuo, Heather Hendrickson, Ghazaleh Eskandari, Hoang A. T. Nguyen, J. Hunter Long, Muthiah Kumaraswami, Jule Goike, Daniel Boutz, Jimmy Gollihar, Jason S. McLellan, Chia-Wei Chou, Kamyab Javanmardi, Ilya J. Finkelstein, James M. Musser

    Published 2020-12-01
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  14. 14
    SARS-CoV-2 Omicron (B.1.1.529) Infection of Wild White-Tailed Deer in New York City

    SARS-CoV-2 Omicron (B.1.1.529) Infection of Wild White-Tailed Deer in New York City by Kurt J. Vandegrift, Michele Yon, Meera Surendran Nair, Abhinay Gontu, Santhamani Ramasamy, Saranya Amirthalingam, Sabarinath Neerukonda, Ruth H. Nissly, Shubhada K. Chothe, Padmaja Jakka, Lindsey LaBella, Nicole Levine, Sophie Rodriguez, Chen Chen, Veda Sheersh Boorla, Tod Stuber, Jason R. Boulanger, Nathan Kotschwar, Sarah Grimké Aucoin, Richard Simon, Katrina L. Toal, Randall J. Olsen, James J. Davis, Dashzeveg Bold, Natasha N. Gaudreault, Krishani Dinali Perera, Yunjeong Kim, Kyeong-Ok Chang, Costas D. Maranas, Juergen A. Richt, James M. Musser, Peter J. Hudson, Vivek Kapur, Suresh V. Kuchipudi

    Published 2022-12-01
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