Ten Simple Rules to becoming a principal investigator. by John S Tregoning, Jason E McDermott

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Accurate prediction of secreted substrates and identification of a conserved putative secretion signal for type III secretion systems. by Ram Samudrala, Fred Heffron, Jason E McDermott

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Ten simple rules for drawing scientific comics. by Jason E McDermott, Matthew Partridge, Yana Bromberg

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Coordinated regulation of virulence during systemic infection of Salmonella enterica serovar Typhimurium. by Hyunjin Yoon, Jason E McDermott, Steffen Porwollik, Michael McClelland, Fred Heffron

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Suppressed expression of T-box transcription factors is involved in senescence in chronic obstructive pulmonary disease. by George K Acquaah-Mensah, Deepti Malhotra, Madhulika Vulimiri, Jason E McDermott, Shyam Biswal

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Prediction of multi-drug resistance transporters using a novel sequence analysis method [v2; ref status: indexed, http://f1000r.es/5ef] by Jason E. McDermott, Paul Bruillard, Christopher C. Overall, Luke Gosink, Stephen R. Lindemann

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Improving network inference algorithms using resampling methods by Sean M Colby, Ryan S McClure, Christopher C Overall, Ryan S Renslow, Jason E McDermott

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Controlling the response: predictive modeling of a highly central, pathogen-targeted core response module in macrophage activation. by Jason E McDermott, Michelle Archuleta, Brian D Thrall, Joshua N Adkins, Katrina M Waters

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Prediction of bacterial E3 ubiquitin ligase effectors using reduced amino acid peptide fingerprinting by Jason E. McDermott, John R. Cort, Ernesto S. Nakayasu, Jonathan N. Pruneda, Christopher Overall, Joshua N. Adkins

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Predicting metabolic modules in incomplete bacterial genomes with MetaPathPredict by David Geller-McGrath, Kishori M Konwar, Virginia P Edgcomb, Maria Pachiadaki, Jack W Roddy, Travis J Wheeler, Jason E McDermott

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Modeling dynamic regulatory processes in stroke. by Jason E McDermott, Kenneth Jarman, Ronald Taylor, Mary Lancaster, Harish Shankaran, Keri B Vartanian, Susan L Stevens, Mary P Stenzel-Poore, Antonio Sanfilippo

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The Missing Pieces: The Role of Secretion Systems in <i>Campylobacter jejuni</i> Virulence by Amber D. Gabbert, Jennifer L. Mydosh, Prabhat K. Talukdar, Lisa M. Gloss, Jason E. McDermott, Kerry K. Cooper, Geremy C. Clair, Michael E. Konkel

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Hi-C metagenome sequencing reveals soil phage–host interactions by Ruonan Wu, Michelle R. Davison, William C. Nelson, Montana L. Smith, Mary S. Lipton, Janet K. Jansson, Ryan S. McClure, Jason E. McDermott, Kirsten S. Hofmockel

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Sequential projection pursuit principal component analysis – dealing with missing data associated with new -omics technologies by Bobbie-Jo M. Webb-Robertson, Melissa M. Matzke, Thomas O. Metz, Jason E. McDermott, Hyunjoo Walker, Karin D. Rodland, Joel G. Pounds, Katrina M. Waters

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Unified feature association networks through integration of transcriptomic and proteomic data. by Ryan S McClure, Jason P Wendler, Joshua N Adkins, Jesica Swanstrom, Ralph Baric, Brooke L Deatherage Kaiser, Kristie L Oxford, Katrina M Waters, Jason E McDermott

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Structural characterization of a soil viral auxiliary metabolic gene product – a functional chitosanase by Ruonan Wu, Clyde A. Smith, Garry W. Buchko, Ian K. Blaby, David Paez-Espino, Nikos C. Kyrpides, Yasuo Yoshikuni, Jason E. McDermott, Kirsten S. Hofmockel, John R. Cort, Janet K. Jansson

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(Phospho)Proteomic dataset of ischemia- and ultrasound- stimulated mouse cardiac endothelial cells in vitro by Uchenna Emechebe, David Giraud, Azzdine Y. Ammi, Kristin L. Scott, Jon M. Jacobs, Jason E. McDermott, Igor V. Dykan, Nabil J. Alkayed, Anthony P. Barnes, Sanjiv Kaul, Catherine M. Davis

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Unlocking the Constraints of Cyanobacterial Productivity: Acclimations Enabling Ultrafast Growth by Hans C. Bernstein, Ryan S. McClure, Eric A. Hill, Lye Meng Markillie, William B. Chrisler, Margie F. Romine, Jason E. McDermott, Matthew C. Posewitz, Donald A. Bryant, Allan E. Konopka, James K. Fredrickson, Alexander S. Beliaev

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Co-expression of CD39 and CD103 identifies tumor-reactive CD8 T cells in human solid tumors by Thomas Duhen, Rebekka Duhen, Ryan Montler, Jake Moses, Tarsem Moudgil, Noel F. de Miranda, Cheri P. Goodall, Tiffany C. Blair, Bernard A. Fox, Jason E. McDermott, Shu-Ching Chang, Gary Grunkemeier, Rom Leidner, Richard Bryan Bell, Andrew D. Weinberg

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Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome by Tanja V. Maier, Marianna Lucio, Lang Ho Lee, Nathan C. VerBerkmoes, Colin J. Brislawn, Jörg Bernhardt, Regina Lamendella, Jason E. McDermott, Nathalie Bergeron, Silke S. Heinzmann, James T. Morton, Antonio González, Gail Ackermann, Rob Knight, Katharina Riedel, Ronald M. Krauss, Philippe Schmitt-Kopplin, Janet K. Jansson

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