Analysis of Matched Tumor and Normal Profiles Reveals Common Transcriptional and Epigenetic Signals Shared across Cancer Types. by Andrew M Gross, Jason F Kreisberg, Trey Ideker

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Structure-Based Analysis Reveals Cancer Missense Mutations Target Protein Interaction Interfaces. by H Billur Engin, Jason F Kreisberg, Hannah Carter

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Evidence for a common evolutionary rate in metazoan transcriptional networks by Anne-Ruxandra Carvunis, Tina Wang, Dylan Skola, Alice Yu, Jonathan Chen, Jason F Kreisberg, Trey Ideker

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Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment by Tina Wang, Brian Tsui, Jason F. Kreisberg, Neil A. Robertson, Andrew M. Gross, Michael Ku Yu, Hannah Carter, Holly M. Brown-Borg, Peter D. Adams, Trey Ideker

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Multimodal perturbation analyses of cyclin-dependent kinases reveal a network of synthetic lethalities associated with cell-cycle regulation and transcriptional regulation by Kyle Ford, Brenton P. Munson, Samson H. Fong, Rebecca Panwala, Wai Keung Chu, Joseph Rainaldi, Nongluk Plongthongkum, Vinayagam Arunachalam, Jarek Kostrowicki, Dario Meluzzi, Jason F. Kreisberg, Kristen Jensen-Pergakes, Todd VanArsdale, Thomas Paul, Pablo Tamayo, Kun Zhang, Jadwiga Bienkowska, Prashant Mali, Trey Ideker

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The condition-dependent transcriptional landscape of Burkholderia pseudomallei. by Wen Fong Ooi, Catherine Ong, Tannistha Nandi, Jason F Kreisberg, Hui Hoon Chua, Guangwen Sun, Yahua Chen, Claudia Mueller, Laura Conejero, Majid Eshaghi, Roy Moh Lik Ang, Jianhua Liu, Bruno W Sobral, Sunee Korbsrisate, Yunn Hwen Gan, Richard W Titball, Gregory J Bancroft, Eric Valade, Patrick Tan

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A genomic survey of positive selection in Burkholderia pseudomallei provides insights into the evolution of accidental virulence. by Tannistha Nandi, Catherine Ong, Arvind Pratap Singh, Justin Boddey, Timothy Atkins, Mitali Sarkar-Tyson, Angela E Essex-Lopresti, Hui Hoon Chua, Talima Pearson, Jason F Kreisberg, Christina Nilsson, Pramila Ariyaratne, Catherine Ronning, Liliana Losada, Yijun Ruan, Wing-Kin Sung, Donald Woods, Richard W Titball, Ifor Beacham, Ian Peak, Paul Keim, William C Nierman, Patrick Tan

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Genome-wide association studies of human and rat BMI converge on synapse, epigenome, and hormone signaling networks by Sarah N. Wright, Brittany S. Leger, Sara Brin Rosenthal, Sophie N. Liu, Tongqiu Jia, Apurva S. Chitre, Oksana Polesskaya, Katie Holl, Jianjun Gao, Riyan Cheng, Angel Garcia Martinez, Anthony George, Alexander F. Gileta, Wenyan Han, Alesa H. Netzley, Christopher P. King, Alexander Lamparelli, Connor Martin, Celine L. St. Pierre, Tengfei Wang, Hannah Bimschleger, Jerry Richards, Keita Ishiwari, Hao Chen, Shelly B. Flagel, Paul Meyer, Terry E. Robinson, Leah C. Solberg Woods, Jason F. Kreisberg, Trey Ideker, Abraham A. Palmer

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