Showing 1 - 18 results of 18 for search 'Jed A. Fuhrman', query time: 0.05s Refine Results
  1. 1
    Effects of phytoplankton, viral communities, and warming on free-living and particle-associated marine prokaryotic community structure

    Effects of phytoplankton, viral communities, and warming on free-living and particle-associated marine prokaryotic community structure by Yi-Chun Yeh, Jed A. Fuhrman

    Published 2022-12-01
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  2. 2
    Metagenomics and Quantitative Stable Isotope Probing Offer Insights into Metabolism of Polycyclic Aromatic Hydrocarbon Degraders in Chronically Polluted Seawater

    Metagenomics and Quantitative Stable Isotope Probing Offer Insights into Metabolism of Polycyclic Aromatic Hydrocarbon Degraders in Chronically Polluted Seawater by Ella T. Sieradzki, Michael Morando, Jed A. Fuhrman

    Published 2021-06-01
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  3. 3
    ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data

    ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data by Yuxuan Du, Jed A. Fuhrman, Fengzhu Sun

    Published 2023-01-01
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  4. 4
    Diverse Marine T4-like Cyanophage Communities Are Primarily Comprised of Low-Abundance Species Including Species with Distinct Seasonal, Persistent, Occasional, or Sporadic Dynamics

    Diverse Marine T4-like Cyanophage Communities Are Primarily Comprised of Low-Abundance Species Including Species with Distinct Seasonal, Persistent, Occasional, or Sporadic Dynamic... by Emily Dart, Jed A. Fuhrman, Nathan A. Ahlgren

    Published 2023-02-01
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  5. 5
    Benchmarking Community-Wide Estimates of Growth Potential from Metagenomes Using Codon Usage Statistics

    Benchmarking Community-Wide Estimates of Growth Potential from Metagenomes Using Codon Usage Statistics by J. L. Weissman, Marie Peras, Tyler P. Barnum, Jed A. Fuhrman

    Published 2022-10-01
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  6. 6
    Taxon Disappearance from Microbiome Analysis Reinforces the Value of Mock Communities as a Standard in Every Sequencing Run

    Taxon Disappearance from Microbiome Analysis Reinforces the Value of Mock Communities as a Standard in Every Sequencing Run by Yi-Chun Yeh, David M. Needham, Ella T. Sieradzki, Jed A. Fuhrman

    Published 2018-06-01
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  7. 7
    Proteorhodopsins dominate the expression of phototrophic mechanisms in seasonal and dynamic marine picoplankton communities

    Proteorhodopsins dominate the expression of phototrophic mechanisms in seasonal and dynamic marine picoplankton communities by Ella T. Sieradzki, Jed A. Fuhrman, Sara Rivero-Calle, Laura Gómez-Consarnau

    Published 2018-10-01
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  8. 8
    Evaluating and Improving Small Subunit rRNA PCR Primer Coverage for Bacteria, Archaea, and Eukaryotes Using Metagenomes from Global Ocean Surveys

    Evaluating and Improving Small Subunit rRNA PCR Primer Coverage for Bacteria, Archaea, and Eukaryotes Using Metagenomes from Global Ocean Surveys by Jesse McNichol, Paul M. Berube, Steven J. Biller, Jed A. Fuhrman

    Published 2021-06-01
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  9. 9
    Phylogenetic Diversity of Diazotrophs along an Experimental Nutrient Gradient in Mangrove Sediments

    Phylogenetic Diversity of Diazotrophs along an Experimental Nutrient Gradient in Mangrove Sediments by Isabel C. Romero, Myrna E. Jacobson-Meyers, Jed A. Fuhrman, Douglas G. Capone

    Published 2015-07-01
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  10. 10
    VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

    VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data by Jie Ren, Nathan A. Ahlgren, Yang Young Lu, Jed A. Fuhrman, Fengzhu Sun

    Published 2017-07-01
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  11. 11
    Accurate genome relative abundance estimation based on shotgun metagenomic reads.

    Accurate genome relative abundance estimation based on shotgun metagenomic reads. by Li C Xia, Jacob A Cram, Ting Chen, Jed A Fuhrman, Fengzhu Sun

    Published 2011-01-01
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  12. 12
    Dynamic marine viral infections and major contribution to photosynthetic processes shown by spatiotemporal picoplankton metatranscriptomes

    Dynamic marine viral infections and major contribution to photosynthetic processes shown by spatiotemporal picoplankton metatranscriptomes by Ella T. Sieradzki, J. Cesar Ignacio-Espinoza, David M. Needham, Erin B. Fichot, Jed A. Fuhrman

    Published 2019-03-01
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  13. 13
    Influence of Light on Particulate Organic Matter Utilization by Attached and Free-Living Marine Bacteria

    Influence of Light on Particulate Organic Matter Utilization by Attached and Free-Living Marine Bacteria by Laura Gómez-Consarnau, Laura Gómez-Consarnau, David M. Needham, Peter K. Weber, Jed A. Fuhrman, Xavier Mayali

    Published 2019-06-01
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  14. 14
    Characterizing Chemoautotrophy and Heterotrophy in Marine Archaea and Bacteria With Single-Cell Multi-isotope NanoSIP

    Characterizing Chemoautotrophy and Heterotrophy in Marine Archaea and Bacteria With Single-Cell Multi-isotope NanoSIP by Anne E. Dekas, Anne E. Dekas, Alma E. Parada, Alma E. Parada, Xavier Mayali, Jed A. Fuhrman, Jessica Wollard, Peter K. Weber, Jennifer Pett-Ridge

    Published 2019-12-01
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  15. 15
    Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

    Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys by William Walters, Embriette R. Hyde, Donna Berg-Lyons, Gail Ackermann, Greg Humphrey, Alma Parada, Jack A. Gilbert, Janet K. Jansson, J. Gregory Caporaso, Jed A. Fuhrman, Amy Apprill, Rob Knight

    Published 2016-02-01
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  16. 16
    Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems.

    Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems. by Lucie Zinger, Linda A Amaral-Zettler, Jed A Fuhrman, M Claire Horner-Devine, Susan M Huse, David B Mark Welch, Jennifer B H Martiny, Mitchell Sogin, Antje Boetius, Alban Ramette

    Published 2011-01-01
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  17. 17
    Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein.

    Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein. by Thomas Riedel, Laura Gómez-Consarnau, Jürgen Tomasch, Madeleine Martin, Michael Jarek, José M González, Stefan Spring, Meike Rohlfs, Thorsten Brinkhoff, Heribert Cypionka, Markus Göker, Anne Fiebig, Johannes Klein, Alexander Goesmann, Jed A Fuhrman, Irene Wagner-Döbler

    Published 2013-01-01
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  18. 18
    Optimizing de novo genome assembly from PCR-amplified metagenomes

    Optimizing de novo genome assembly from PCR-amplified metagenomes by Simon Roux, Gareth Trubl, Danielle Goudeau, Nandita Nath, Estelle Couradeau, Nathan A. Ahlgren, Yuanchao Zhan, David Marsan, Feng Chen, Jed A. Fuhrman, Trent R. Northen, Matthew B. Sullivan, Virginia I. Rich, Rex R. Malmstrom, Emiley A. Eloe-Fadrosh

    Published 2019-05-01
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