Jianlin Cheng
Jianlin (Jack) Cheng is the William and Nancy Thompson Missouri Distinguished Professor in the Electrical Engineering and Computer Science (EECS) Department at the University of Missouri, Columbia. He earned his PhD from the University of California-Irvine in 2006, his MS degree from Utah State University in 2001, and his BS degree from Huazhong University of Science and Technology in 1994.His research interests include bioinformatics, machine learning and artificial intelligence. His current research is focused on protein structure and function prediction, 3D genome structure modeling, biological network construction, and deep learning with applications to big data in biomedical domains.
Dr. Cheng has more than 180 publications in the field of bioinformatics, computational biology, artificial intelligence, and machine learning, which have been cited thousands of times according to [https://scholar.google.com/citations?user=t9MY6lwAAAAJ&hl=en Google Scholar Citations]. He and his students developed one of the first deep learning methods for protein structure prediction and demonstrated that deep learning was the best method for protein structure prediction for the first time in the 10th community-wide Critical Assessment of Techniques for Protein Structure Prediction ([http://www.predictioncenter.org/casp10/index.cgi CASP10]) in 2012. His protein structure prediction methods (MULTICOM) supported by the National Institutes of Health (NIH) and the National Science Foundation (NSF) were consistently ranked among the top methods during the last several rounds of the community-wide Critical Assessment of Techniques for Protein Structure Prediction ([http://www.predictioncenter.org/casp15/index.cgi CASP]) from 2008 to 2022. Dr. Cheng was a recipient of [https://www.nsf.gov/awardsearch/showAward?AWD_ID=1149224&HistoricalAwards=false 2012 NSF CAREER award] for his work on 3D genome structure modeling. He is a fellow of American Institute for Medical and Biological Engineering (AIMBE) and a fellow of Asia-Pacific Artificial Intelligence Association (AAIA). Provided by Wikipedia
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CONFOLD2: improved contact-driven ab initio protein structure modeling by Badri Adhikari, Jianlin Cheng
Published 2018-01-01
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Geometry-complete diffusion for 3D molecule generation and optimization by Alex Morehead, Jianlin Cheng
Published 2024-07-01
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De novo atomic protein structure modeling for cryoEM density maps using 3D transformer and HMM by Nabin Giri, Jianlin Cheng
Published 2024-06-01
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VEHiCLE: a Variationally Encoded Hi-C Loss Enhancement algorithm for improving and generating Hi-C data by Max Highsmith, Jianlin Cheng
Published 2021-04-01
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Cryo2StructData: A Large Labeled Cryo-EM Density Map Dataset for AI-based Modeling of Protein Structures by Nabin Giri, Liguo Wang, Jianlin Cheng
Published 2024-05-01
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DeepDist: real-value inter-residue distance prediction with deep residual convolutional network by Tianqi Wu, Zhiye Guo, Jie Hou, Jianlin Cheng
Published 2021-01-01
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DIPS-Plus: The enhanced database of interacting protein structures for interface prediction by Alex Morehead, Chen Chen, Ada Sedova, Jianlin Cheng
Published 2023-08-01
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A Survey of Deep Learning Methods for Estimating the Accuracy of Protein Quaternary Structure Models by Xiao Chen, Jian Liu, Nolan Park, Jianlin Cheng
Published 2024-05-01
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A large expert-curated cryo-EM image dataset for machine learning protein particle picking by Ashwin Dhakal, Rajan Gyawali, Liguo Wang, Jianlin Cheng
Published 2023-06-01
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Denoising Long-Tail Augmented Contrastive Network for Multi-Behavior Recommendation by Jinle He, Chengyong Yang, Jiayi Liu, Jianlin Cheng
Published 2024-01-01
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